KEGG   Diospyros lotus (date-plum): 127789869
Entry
127789869         CDS       T10632                                 
Name
(RefSeq) uncharacterized protein LOC127789869
  KO
K12828  splicing factor 3B subunit 1
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127789869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dlt03041]
    127789869
   03036 Chromosome and associated proteins [BR:dlt03036]
    127789869
Spliceosome [BR:dlt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127789869
 Complex B
    127789869
 Complex C
   U2 SnRNP specific factors
    127789869
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127789869
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 127789869
NCBI-ProteinID: XP_052174881
LinkDB
Position
14:9559809..9566013
AA seq 1278 aa
MASVDPEIAKTQEERKKMEQQLASLTSVTFDTDLYGGNNPFEGYEQSIPVNDEDYENFDS
MDSEVARKLASYTAPKSLLKDMPRGGDEDASMGGFKKPQRIIDREDDYRRRRLNRVISPD
RHDAFAAGDKTPDVSVRTYADVMREEALKRAKEDTLRAIAKKKKEEEENKAADKEREPPP
AAASLQPSQQQKRRNRWDQSQDDNSAKKAKTASDWDLPDSTPGIGRWDATPTPGRIGDAT
PSLSRRNRWDETPTPGRLADSDATPAAGGATPGATPAGMTWDATPKLAGLATPTPKRQRS
RWDETPATMGSATPIAGATPAAAYTPGVTPVGGVELATPTPGAINLRGAITPEQYNLLRW
EKDIEERNRPLTDEELDAMFPQEGYKILEPPPTYVPIRTPARKLLATPTPLGTPLYSIPE
ENRGQQFDVPKELPGGLPMMKPEDYQYFGALLNEENEEEMSPEEQKERKIMKLLLKVKNG
TPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNT
TARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLV
EIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFL
KAIGFIIPLMDAIYASYYTKEVMIILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIR
NDILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRM
VMETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVK
PYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHV
INAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPM
LDNEDHNVYSRPELMMFV
NT seq 3837 nt   +upstreamnt  +downstreamnt
atggcttccgtggatcctgagattgcgaagacccaagaagaaaggaaaaagatggaacaa
cagcttgcgtctctaacttcagttactttcgacaccgatctatatggcggcaacaacccc
tttgagggctacgaacaatcgattcccgtcaatgacgaggactacgagaactttgattca
atggattcggaggtcgcgagaaagttggcatcgtacacagcccccaagtccttgctgaag
gacatgcccaggggtggggatgaggacgcttccatgggcgggttcaagaaacctcagagg
attattgatagggaggatgattacaggcggagaagattgaaccgggttatctctccagac
cgtcatgatgcgtttgctgccggggataagacccctgacgtgtctgtcaggacctatgct
gatgtaatgagggaggaggctttgaagagagcgaaggaagatactttgagggcaattgcg
aaaaagaagaaagaagaggaggagaataaggctgcagacaaggaaagagaaccaccacct
gctgctgcgtcactgcaaccatctcagcagcaaaagaggaggaataggtgggatcaatcc
caggatgataactctgctaagaaagctaagactgcttcagattgggatttgcctgattcc
actcctgggattggaaggtgggatgcgacaccaactcctggaagaattggtgatgcaact
ccatccctgtctaggaggaacaggtgggatgagacccccacgcctggccgtttggctgat
tcagatgcaacccctgcagccggtggggctactcctggtgctaccccagctgggatgacc
tgggatgccacccctaaattggcaggacttgctactccaaccccaaaacgtcagagatca
aggtgggatgagactccggctacaatgggaagtgccacaccaatagctggtgctacccct
gctgctgcatatacccctggggtgactcctgtaggaggggttgaacttgctacacccact
cctggagctattaatctccgtggtgccataactcccgagcagtataatttgttgaggtgg
gagaaggatattgaagaaagaaaccgccctttaacagatgaagagctggatgccatgttc
ccacaggagggctataagattctagagccaccaccaacctatgtacctatcaggacacct
gctagaaagcttctcgctaccccaactccactgggaacacctctttattctattcctgag
gaaaaccgtggtcaacaatttgatgttccaaaagagttgccaggtggattgccaatgatg
aaacccgaagattatcagtactttggtgcgttgttgaacgaagaaaatgaagaggagatg
tcccctgaagagcaaaaagagcgaaagatcatgaagcttctgctcaaggtcaagaatggg
acacctcctcagaggaaaacagctctgagacagcttactgacaaggctcgagaattcggt
gctggtccattatttaatcggattttgccactgcttatgcaacccacattggaggatcag
gagagacaccttttggttaaggtaattgatagggtgctatacaagttagatgaattagtc
cgtccttatgtgcacaaaattctggtcgtgattgagcccttgttgattgatgaagattat
tatgctcgtgtagagggtagggagatcatttccaatctcagcaaggcagctggtttggct
actatgattgctgctatgcgtccagatatagataacatagatgagtatgtgaggaacacc
actgcaagagcctttagtgttgttgcttcagcgcttggcattcctgcattgctgccattc
ttgaaagctgtgtgtcaaagtaagaaatcttggcaagctcgtcatactggcatcaaaatt
gttcagcagatagcaattctgattggttgtgctgttcttccacacttgagatctcttgtt
gaaatcattgaacacggtctcaatgatgagaaccagaaggtcagaaccattacggctttg
tctttggctgctcttgctgaggctgctgcaccttatggtattgaaagctttgactcagtt
cttaagccattgtggaagggtattagatcacaccgtgggaaagtattggccgctttcttg
aaggcaattggtttcatcatccctctgatggatgcaatatacgccagttactatacaaaa
gaagtgatgattattttaattcgggagtttcagtcccctgatgaagaaatgaagaaaatt
gtgctgaaggtggtcaagcagtgtgtgagcacggaaggtgtggaggcagattacatcaga
aatgatattcttcccgagtttttccggaatttctgggtcagaagaatggctttggatcgc
agaaactataggcagcttgtggaaacaactgtggagattgctaacaaggttggtgtggca
gatatagtgggaagaatagttgaggaccttaaagatgagagtgagccatataggcgtatg
gttatggagacaattgagaaggtggttacaaatttgggtgcatctgacattgatgccaga
ttggaggagcttctgattgatggcattctctatgccttccaggagcaaaccagtgatgat
gcaaatgtgatgcttaatgggtttggtgcagttgtgaattccttggggcagagggtgaag
ccatatcttccccagatatgtggtactataaagtggcgcctgaacaacaagagtgcgaaa
gtgagacagcaagcggctgatctcatctccaggattgctgtggtcatgaagcagtgccaa
gaagagcagctgatgggccatctcggggttgtcttgtatgagtatttgggggaggagtac
ccagaagttttgggatcaatactgggagcgcttaaggcaattgttaacgttattggtatg
acaaagatgactcctccaataaaggatttgctccctcgattaacacccatattgaagaat
cgtcatgagaaagtccaggagaattgtattgaccttgttggtcgaattgctgatcgtggt
gctgagtttgtacctgcaagagagtggatgagaatctgttttgagcttctggagatgctt
aaagcacacaagaagggtatccgaagagctactgttaacacgtttgggtacattgcaaaa
gccattgggccacaagatgtcctggcaacattattgaacaacctcaaggtgcaagagcgt
caaaatcgtgtctgcactactgtggcaattgcaattgttgcagaaacatgttctcctttt
acggttctacctgccttgatgaatgagtatcgtgtgccagagcttaatgttcagaatggt
gttctgaagtccctctcatttctatttgagtatataggtgaaatggggaaggactatatt
tatgcagtgactccattacttgaggatgccttaatggacagggatctggttcatagacag
actgctgcttctgctgtgaagcacatggcgttaggagttgctgggttaggatgtgaggat
gctttagttcacttgctgaactatgtctggccaaacatttttgagacatcgccccatgtt
ataaatgctgttatggaagccattgaagggatgagggtggcactgggtgcagctgtagtg
ctcaactactgtcttcagggactattccatcctgctaggaaggtcagggaagtgtactgg
aagatctataactcgctgtatattggatctcaagacgcacttgttgctgcatatcctatg
ctggacaatgaggaccataatgtatacagtaggcctgagttgatgatgtttgtctga

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