Diospyros lotus (date-plum): 127789892
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Entry
127789892 CDS
T10632
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127789892
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127789892
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NCBI-GeneID:
127789892
NCBI-ProteinID:
XP_052174923
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Position
14:12483094..12508711
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AA seq
891 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLESSITRHKA
HIKKLEWILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEDFCDVDDLYNTLPLDKVES
LEDLVTIGPPAIVKGVVATNAVLGTKTSLTALPAQQPATATSIQEQAEQSASLDSTAELP
ARTAPPKTGSGGSTPSTPIVSRAAPVAVNASPHYTSVASAASKIMSGPSSDRSVLESAGA
ATSSTLINMSISGKEEEPVSFPGRKPSPVLAETALRGVGRGGLSNLPSTSMPLSSGSAVP
SDGTAGAVPLTSEIGKRNILGADEKLGSSGIVQPPVSPLSNRMIFSQTVKTNDGNSSVDG
DNISEGAVMAGKVFSPSLVSGMQWRPGSPFQNQSEVGQFRGRAEIAPDQREKFLERFQQV
QQHGQSNLLGIPPLNGGNHKQYSAQQQNTLLQQFNSQSSSVSPHLALGVQAPSLGTVASS
SHQQPNSTHQQLSQQALISSGLKDAEVVHGKAEDPQQQNLSDNSTTEPSKASGFGKNLAA
DNDLKPSHEIDAPAGVSGSLIESSQVPRDSGLSPGHPLQSNQSSGNLGVIGRKSVSDLGA
IGDNLGSSANSGTMHDQLYNLQMLEAAYYKLPKLRDSERAKTYTPKHPAIVPQSYPQAPA
PIVNNPAFWERIGSEYGPDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHE
EPNVTTDEYEQGTYVYFDYHSGNDEIQHGWCQRLKTEFTFEYNYLEDELII
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaagtcggaagctacagggcgagatcgatcgggttctgaagaaagttcaagag
ggggttgatgttttcgacagcatttggaacaaggtttatgacaccgacaatgcgaatcag
aaggagaaattcgaggccgatttgaagaaggagatcaagaaacttcagaggtacagagac
cagatcaaaacatggattcagtccagcgaaattaaggataagaaggttagtgcctcttat
gagcaggctctcatggatgcgcgcaagctcattgagcgtgaaatggaaaggtttaagata
tgcgagaaagaaaccaagacaaaagcattctccaaggaaggcctgggccaacaacctaaa
acggacccgaaggagaaggccaaatcggagacgagagattggttgaacaatgtggtagga
gagttggaatctcaaattgatagctttgaagctgagattgaggggctttctgttaagaag
ggaaaaacaaggccacccagattgacacatttagagtcatctattacccgccacaaggct
catataaagaagttagaatggattttaagactgttggataatgatgaattgagtcctgag
caggtcaatgatgttaaggatttcttggacgactatgttgagcgcaatcaggaggatttt
gaagacttctgtgatgttgatgacctttacaacactctgccattagacaaggtggaatct
cttgaagatctagttacaattggtcctcctgctattgttaagggcgttgttgccacaaat
gcagttttaggaacaaaaacttctttgacagcactgccagctcaacagccagccacagca
acatccatccaagagcaagctgaacaaagtgcttcccttgacagtactgctgaacttcct
gctaggactgcaccacctaaaactggatcaggtggctctactccatcaacaccaatagtg
agccgtgcagctcctgttgctgtgaatgcttcacctcattatacttctgttgcatcagct
gcttcaaaaattatgtcaggtccaagttctgatcgaagtgtcctggaaagtgcaggtgct
gctacatcttcaactcttataaatatgtccatttctggtaaggaggaagagccagtcagc
ttccctggtcgtaaaccatctcctgttctggctgaaacagcattaaggggtgttggtaga
ggtggcctgtcgaatcttccctctactagcatgcctctaagttctggaagtgctgttcct
agtgatggaaccgctggtgctgttcctttaacttctgagatagggaagagaaatatattg
ggagctgatgagaaacttgggagtagtggcatagtgcagccaccagtttccccactaagt
aatagaatgattttttcacagactgtgaagactaatgatggaaacagttcagttgatggt
gataatatcagtgagggtgcagttatggctggcaaggtcttctccccctctttagtttct
ggtatgcagtggaggccaggaagtccctttcagaaccagagtgaagtcggacagtttcgt
ggaagagctgaaattgctcctgatcagagagagaaatttttggagcgtttccagcaagtg
caacaacatggtcaaagtaaccttcttggcatcccacctcttaatggaggaaatcataag
cagtactctgcacaacaacagaacactctcttgcagcagttcaattctcaaagctcatct
gtctcgccgcatttggcacttggagtccaagcaccaagccttggtactgttgcatcttcc
tcgcaccagcagccaaattcaacccatcagcaactatctcagcaggcattaatatcatca
ggactaaaagatgctgaagttgtccatgggaaagctgaggacccacagcagcagaatctg
tctgacaattcaaccactgaaccctctaaagcttctgggtttggcaagaaccttgctgct
gacaatgatctgaaaccttctcatgaaatagatgcacctgcaggggtatctggttctttg
atagagtcttcacaagtgccaagggattccggtctttctcctggtcatcctttgcaatcc
aatcaatcttcaggaaaccttggtgttattggtcgaaaaagtgtttcagaccttggggct
attggtgataatcttggatcatctgcaaattctgggacaatgcatgaccaattatacaat
ttgcaaatgcttgaggctgcttattacaagcttcccaaactcagagactctgaacgtgca
aaaacctacactccgaagcaccctgcaattgttcctcagagctatcctcaagcaccggcg
cccattgtcaataatcctgcattctgggaacgaataggaagtgaatatggtcctgatacc
ctcttctttgcattttactaccaacagaatacttatcaacaatatttagctgcaaaggaa
ttgaagaagcaatcatggaggtaccacaggaaatataatacatggtttcagcggcatgag
gagccaaatgtgaccactgatgagtatgaacagggtacatatgtatacttcgattatcac
agtggcaatgacgagattcagcatggatggtgccaaagactcaagactgaattcacgttc
gagtacaactatcttgaagacgagcttatcatatag
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