Diospyros lotus (date-plum): 127790267
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Entry
127790267 CDS
T10632
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127790267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127790267
03009 Ribosome biogenesis [BR:
dlt03009
]
127790267
04131 Membrane trafficking [BR:
dlt04131
]
127790267
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127790267
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127790267
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127790267
Membrane trafficking [BR:
dlt04131
]
SNARE
SNARE associated proteins
Others
127790267
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127790267
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127790267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
ABC_tran
Viral_helicase1
NB-ARC
NACHT
Vps4_C
AAA_7
TsaE
IstB_IS21
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
127790267
NCBI-ProteinID:
XP_052175607
LinkDB
All DBs
Position
14:complement(3329612..3335524)
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AA seq
805 aa
AA seq
DB search
MSNQPESSDSKGTKRDYSTAILERKKAANRLVVDEAVNDDNSVVALHPNTMEKLQLFRGD
TILIKGKKRKDTICIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
DDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
TSAGATGSDPFAASAGGADEDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaaccggaatcatccgactccaaggggacgaagagggactacagtacggcg
attctggagcggaagaaggccgctaatcggctcgtcgtcgacgaagcggtgaacgatgac
aactccgtggtggcgctccaccccaacactatggagaagctgcagctcttccgcggcgac
accatcttgatcaagggcaagaaaagaaaagatactatttgcattgcacttgctgatgaa
acttgcgatgaaccaaagattaggatgaacaaggttgtcagatcaaacctgagggtccga
ctaggtgatgttgtttctgtccatcagtgtgctgatgtcaaatatgggaaaagggtgcac
atccttccaatagatgacacagttgaaggggttactggaaatctttttgatgcctatctg
aagccttacttcctggaagcgtaccgccctgtgaggaagggtgacttgttccttgtaagg
ggtggaatgagaagtgtagagttcaaggttattgagactgatcctgctgaatactgtgtg
gttgcccctgatactgagatcttctgcgagggagaacctgtgaaaagggaggatgaggac
aggttagacgaagttggttatgatgatgtcggtggtgttcgtaaacaaatggcacagatt
cgggagttagtagagctgccattgaggcatcctcaacttttcaagtcaattggtgtaaag
ccacccaaagggattctgctatatggacctccagggtctggcaagactctcattgcccga
gctgttgctaatgaaactggtgctttcttcttctgcattaatggaccagagattatgtca
aagttggcaggagagagtgaaagcaatctcaggaaagcatttgaggaagcagagaagaat
gcaccttcaataatttttattgatgagattgattcaattgctcccaagagagagaaaaca
catggagaagttgagaggagaattgtgtcccagctcttgacacttatggatggacttaaa
tcacgtgcccatgttattgtcattggtgctaccaaccgtcccaacagcattgaccctgcc
ttgaggaggtttgggagatttgatagggagatagatattggtgttccagatgaagttggc
cgacttgaggttcttcgtatccacaccaagaatatgaagcttgctgaagatgttgactta
gaaagaattgcaaaggacacacatggttatgttggtgctgatctggcagctctgtgcaca
gaggctgcacttcaatgcatcagagagaagatggatgtgattgacttggaagatgagaca
atagatgcagagattctcaactccatggctgttacaaatgaacacttccagactgccctt
ggaacaagcaatccttcagctctgcgtgaaactgttgttgaggtgcctaatgtcagttgg
gacgatgttggaggtcttgagaatgttaagagggagttgcaagagaccgtgcaatatcct
gtggagcatcccgagaagtttgagaagtttggaatgtcgccctcaaagggagttcttttc
tatggcccacctggttgtgggaaaactctactagccaaggctattgctaatgaatgtcag
gccaacttcattagtgtcaaaggtcctgaattgcttaccatgtggtttggagaaagtgaa
gctaatgtacgagaaatatttgataaggctcgccaatctgctccttgcgtcctattcttt
gatgaactcgactcaattgccacccagagaggaagcagtgttggagatgctgggggtgca
gctgatagggttttgaatcaacttctcactgaaatggatggaatgtcggcaaagaagact
gttttcattattggggccacaaacaggcctgatataattgatcctgcacttttgaggcct
gggcgtcttgatcagttaatttatatccccctacctgatgaggattctcggcatcagatc
ttcaaggcttgtctgaggaaatctcctgtttccaaagatgttgacctgagagcccttgcc
aagtacacccagggcttcagtggtgctgatattacagaaatatgccaacgagcatgcaaa
tatgcaatcagggagaatattgagaaagatattgagagggaaaggaggaggagggataac
ccggaggccatggaagaggatgttgaagatgaggtggcagagatcaaggctgcccatttc
gaagaatcgatgaagtatgctcggaggagtgtcagtgatgctgacattcggaaataccag
gcctttgctcaaactttgcagcagtcgagagggtttggctctgaattccggttctcagag
accagtgctggtgctactggatctgatccttttgcagcatctgctggtggggctgatgaa
gatgatctctataattag
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