KEGG   Diospyros lotus (date-plum): 127790268
Entry
127790268         CDS       T10632                                 
Name
(RefSeq) histone deacetylase 6 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03082  ATP-dependent chromatin remodeling
dlt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127790268
   03083 Polycomb repressive complex
    127790268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dlt03036]
    127790268
Enzymes [BR:dlt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127790268
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127790268
   HDAC complexes
    Sin3A-HDAC complex
     127790268
    BRAF-HDAC complex
     127790268
    REST complex
     127790268
    SHIP complex
     127790268
    MiDAC complex
     127790268
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127790268
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127790268
  Chromatin remodeling factors
   NuRD complex
    127790268
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127790268
NCBI-ProteinID: XP_052175608
LinkDB
Position
14:34030201..34054531
AA seq 435 aa
MESWSNDGASLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMSHNLIVHYSLHR
RMEINRPFPASPGDIRRFHSYDYVEFLSSVSPDTLHDHTYARHLKRFNVGEDCPVFQGLF
SFCQASAGGSLGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH
RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGFGNGKYYALNVP
LNDGMDDDSFRGLFRPILRKVMEVYQPDAVVLQCGADSLAGDRLGGFNLSVRGHADCLRY
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIEP
SNVENLNSARDLEKIRNMLLEQLSRLPHAPSVPFQTTPQITEVPEEAEEDMDKKPKPRIW
NGEDCESDADEEERP
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggagagttggagtaacgatggcgcatcgctgccgtccggtcccgacgcgaagaaacgg
cgagtgacgtacttctatgagccatcgatcggcgactactactatggccagggacacccg
atgaaaccccaccgcatccgcatgtctcacaacctcatcgtccactactccctccaccgc
cgcatggagatcaaccgccccttcccggcctcccccggcgatatccgccgcttccactca
tacgactacgtcgagttcctctcctccgtctcccccgacaccctccatgaccacacctac
gcccgccacctgaagcgcttcaatgtcggcgaggactgccccgtcttccagggcctcttc
tcgttctgccaggcctccgccggcggctccctcggcgccgccgtcaagctcaaccgccaa
gacgccgacatcgctatcaattgggccggagggcttcatcacgccaagaagtccgaggcc
tccgggttttgctacgtgaacgacatcgttttggggattctcgaactcctcaaggttcac
aggcgcgtattgtatgttgatattgatgttcaccatggagatggtgtggaggaggcattt
tacaccactgacagagtgatgactgtgtctttccataaatttggggatttctttcctgga
actgggcatattaaagacattggatttgggaatggtaagtactatgccctaaatgtcccc
ttgaatgatggaatggacgatgacagctttcgtggtctatttcggcccatcctccgaaaa
gttatggaggtataccagccagatgcagttgttctccaatgtggagcagattcattggct
ggtgacagactggggggcttcaacttgtctgtgagaggccatgcagattgccttcgttat
cttagatcattcaatgttcctctgatggtattgggtgggggaggctataccattaggaat
gttgcccgctgctggtgctatgagactgctgtagccgttggggtggaacctgataataaa
ttgccttacaatgaatattatgaatactttggtccagactatactcttcacattgaacca
agcaatgtggagaacctgaactcagcccgggatttggaaaaaatacggaacatgttactt
gagcaactgtccagattgccacatgcaccaagtgtaccatttcaaaccacacctcaaatt
acagaagttccagaagaggctgaagaagatatggataaaaaaccaaaacctcgtatatgg
aatggcgaggattgcgagtctgatgctgatgaagaggagagaccttga

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