Diospyros lotus (date-plum): 127790268
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Entry
127790268 CDS
T10632
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03083
Polycomb repressive complex
Brite
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127790268
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
127790268
HDAC complexes
Sin3A-HDAC complex
127790268
BRAF-HDAC complex
127790268
REST complex
127790268
SHIP complex
127790268
MiDAC complex
127790268
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127790268
Heterochromatin formation proteins
Other heterochromatin formation proteins
127790268
Chromatin remodeling factors
NuRD complex
127790268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127790268
NCBI-ProteinID:
XP_052175608
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Position
14:34030201..34054531
Genome browser
AA seq
435 aa
AA seq
DB search
MESWSNDGASLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMSHNLIVHYSLHR
RMEINRPFPASPGDIRRFHSYDYVEFLSSVSPDTLHDHTYARHLKRFNVGEDCPVFQGLF
SFCQASAGGSLGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH
RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGFGNGKYYALNVP
LNDGMDDDSFRGLFRPILRKVMEVYQPDAVVLQCGADSLAGDRLGGFNLSVRGHADCLRY
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIEP
SNVENLNSARDLEKIRNMLLEQLSRLPHAPSVPFQTTPQITEVPEEAEEDMDKKPKPRIW
NGEDCESDADEEERP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagagttggagtaacgatggcgcatcgctgccgtccggtcccgacgcgaagaaacgg
cgagtgacgtacttctatgagccatcgatcggcgactactactatggccagggacacccg
atgaaaccccaccgcatccgcatgtctcacaacctcatcgtccactactccctccaccgc
cgcatggagatcaaccgccccttcccggcctcccccggcgatatccgccgcttccactca
tacgactacgtcgagttcctctcctccgtctcccccgacaccctccatgaccacacctac
gcccgccacctgaagcgcttcaatgtcggcgaggactgccccgtcttccagggcctcttc
tcgttctgccaggcctccgccggcggctccctcggcgccgccgtcaagctcaaccgccaa
gacgccgacatcgctatcaattgggccggagggcttcatcacgccaagaagtccgaggcc
tccgggttttgctacgtgaacgacatcgttttggggattctcgaactcctcaaggttcac
aggcgcgtattgtatgttgatattgatgttcaccatggagatggtgtggaggaggcattt
tacaccactgacagagtgatgactgtgtctttccataaatttggggatttctttcctgga
actgggcatattaaagacattggatttgggaatggtaagtactatgccctaaatgtcccc
ttgaatgatggaatggacgatgacagctttcgtggtctatttcggcccatcctccgaaaa
gttatggaggtataccagccagatgcagttgttctccaatgtggagcagattcattggct
ggtgacagactggggggcttcaacttgtctgtgagaggccatgcagattgccttcgttat
cttagatcattcaatgttcctctgatggtattgggtgggggaggctataccattaggaat
gttgcccgctgctggtgctatgagactgctgtagccgttggggtggaacctgataataaa
ttgccttacaatgaatattatgaatactttggtccagactatactcttcacattgaacca
agcaatgtggagaacctgaactcagcccgggatttggaaaaaatacggaacatgttactt
gagcaactgtccagattgccacatgcaccaagtgtaccatttcaaaccacacctcaaatt
acagaagttccagaagaggctgaagaagatatggataaaaaaccaaaacctcgtatatgg
aatggcgaggattgcgagtctgatgctgatgaagaggagagaccttga
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