Diospyros lotus (date-plum): 127790755
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Entry
127790755 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127790755
03015 mRNA surveillance pathway
127790755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127790755
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127790755
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127790755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127790755
NCBI-ProteinID:
XP_052176372
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Position
14:complement(4039323..4045277)
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AA seq
500 aa
AA seq
DB search
MADNETTTTAPAPAPAPAPAPSKPEVKRSWGDEAEEEASEERDVPSTSADLKIDSLAIDD
SKKKHDFLDDPEDSNIKAVTAGDTLYASAKTFEDLNLSPDLLKGLYAEMKFERPSKIQAV
SLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRIDPKLNAPQALCICPTRELAIQNMEV
LKKMGKFTGITSECAVPMDSSNYIPIQKRPPMTAQVVIGTPGTINKWLTAKKLSMNFLKI
LVFDEADHMLAESGFKDDSLRIMKGIVRSSPDCQVLLFSATFDESVKAFVSKIVKDLFKG
DYNQMFVNREELSLESVKQYKVRCPDELAKILVIKDKIFEVGQKLGQTIIFVRTRNSAGM
LHKALTDYGYEVTTIQGALKQEDRDKIVKEFKDGLTQVLISTDVLARGFDQSLVNLVVNF
DLPVKHSNPSEPDCEVYLHRVGRAGRFGRKGAVFNLLCDDRGDGMIMAKIERHFNMEVAE
VPSWTSNEDFEAALKKAGLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgagaccaccaccaccgcccccgcccccgcccccgcccccgcccccgcc
ccatcgaagccggaggtcaagcgatcatggggcgacgaagcggaagaagaagcctccgaa
gaacgagatgttccttcaacctccgccgacctcaaaatcgactctttagccatcgacgac
tccaagaagaagcacgacttcctcgacgaccccgaagactccaacatcaaagccgtcaca
gcgggcgatacgctgtatgcatctgcgaagacgttcgaggacttgaacttgtccccggac
ctgttgaagggactgtatgcggaaatgaagttcgagagacctagtaagatccaggccgtc
agtctgcccatgattctgactccgccctataagcacctgattgcccaagcacacaatggt
tccgggaagaccacttgtttcgtgctcggcatgttgagtcgcattgatccgaaactcaat
gctcctcaggcgctctgtatctgtcccactcgagaattggcgattcagaacatggaagtt
ctaaagaagatggggaagtttaccggaattacttctgaatgtgctgtgccaatggatagc
tccaattatattccaattcagaagcgaccacccatgacagcacaagtagtgattggcaca
cctggtacaatcaataaatggctgacagcaaaaaaattgagcatgaattttttgaagatt
ctggtttttgatgaagctgaccacatgttggcagagagtggctttaaagatgattctctg
aggatcatgaagggaatagtccgaagcagtccagactgccaggtgcttctcttttctgcc
acttttgatgaatctgtcaaggccttcgtgtcgaagattgttaaagatctgttcaaaggt
gactacaaccaaatgtttgtgaacagagaagaactgtccttggagtctgtaaagcagtac
aaggtgagatgtcctgatgagcttgcaaagatactggttatcaaagacaagatttttgaa
gtaggacagaagttagggcagacaatcatttttgttcgcacaagaaacagtgccggcatg
ctgcataaagcacttaccgattatggctatgaggtaacaactattcaaggtgctctaaag
caagaagacagggacaagatagtcaaggagtttaaagatgggttaactcaagtactcata
tcaactgatgttctggcccgtggttttgaccaatcactggttaacttggtggtcaatttt
gatcttccagtgaagcatagcaatccgtcagagcctgattgtgaggtgtacttgcatcgg
gttgggagggcaggacgctttggacgaaagggagctgtgttcaatttgctatgtgatgat
aggggggatggcatgatcatggctaaaattgagaggcattttaacatggaagtagccgag
gtaccctcctggacaagcaacgaagactttgaggctgctcttaagaaagctggtttgctt
taa
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