Diospyros lotus (date-plum): 127791181
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Entry
127791181 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127791181 isoform X1
KO
K06100
symplekin
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127791181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127791181
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127791181
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127791181
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127791181
U7-dependent histone pre-mRNA processing factors
127791181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
127791181
NCBI-ProteinID:
XP_052176976
LinkDB
All DBs
Position
14:complement(979652..1013688)
Genome browser
AA seq
1327 aa
AA seq
DB search
MVGIMAATSREKLAALLNSAKFATDVPSRLEKLSQLNPQLCQAGDPVLIAEFLPPLLDLH
SDRSSPVRKLIAETIGDIGLKHMEFIPDIAPILMTVLKDGTPAVARQAIASGIDLFRSTL
VKVAIQGLYSSELDDCLESSWTWVLKLRDEIYSIAFQPRNDGTRLLALKFVEAVILLYTP
DPSGSSEPPSQLDSEGDFEFNISWIRGGHPVLNVGDLSIEASQNLGLLLDQLRLPTVKSL
NNSMIIVLINSLSSIAKGRPAFYGRILPVLLGLDPSSSLNKRVPVFGVHHALKNAFLSCL
KCTHPSAAPWRDRLVAALRAMKAGVSVEQALQQVYQINGSVEQKDDLQVTQEKKPSIKGD
DAVHANAGRKRAGVLDARDLVEEYDGSGKRACLTPTASEKLEQDLNRDQDDIPSRGVSRG
DGDNGPVQQLVAMFGALVAQGEKAMVSLEILISSISADLLAEVVMANMRHLPPNQPTTED
NDDSLGSCPNIAGYDNQFRNLSSTLKEMLSTSNVATQMDSVSDAEQSQSTDVEINRGKEE
RPLVTVADNDFVSSDVHHGVEQALVPVPVSSSGEVPSATLNGFSALPSKVLDVANLESEI
PGLDSTARSDGLAETLVSSLPPMDMEDASQEQVSSLGRLSVDLVPSMSTDRSEELSPKAA
VTDVSSINSSTATSVGLPIQFMLPKMSAPVINLADEDKDQLQKLAFIRIVEAYKQIAIAG
GSHVRFSLLAYLGAEFPLDLDPWNVLQKHILSDYMNHEGHELTLRVLYRLFIEAEEEQDF
ISFTTAKSVYEMFFLNVAETLRDSFPASDKSLSRLLGEAPYLPNSIFKLLESLCSPGSSD
KAEKDSLSGDRVHQGLSTVWSLILLRPAIRDVCLRIALQSAVHHLEEVRMKAIRLVANKL
YPLSSISQQIEDFGKEMLYSVTKGDYMMGRIDGDRSEIPKDSNLDKPSIEQPSVAPISKD
NSSDASQLGVPQNLSTSLTEAQRCMSLYFALCTKKHTLFREIFVVYKSTSDAVKQAVHNQ
IPILVRTIGSSSELLEIISDPPTGSENLLLQVLHTLTDGIVPSPELVLTIKKLYDTKVKD
IEVLIPVLSYLPKDEVLVIFPHLVNLPLDKFQVALGRVLQGSHSGQVLSPAEVLIAIHGI
DPDKDKIPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFP
ALVEFIMEILSRLVNKQIWKYPKLWVGFLKCALLTKPQSFSVLLQLPPAQLENALNRTAA
LKAPLVAHANQPNIRATLPRSTLAVLGIASDSQNFSQPQTTPARTADTGNSDKEAVTEKP
KESSSAS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaatcatggcggcgacgtcgagagaaaagctagcagccctcctgaactccgcc
aagttcgccacggacgtgccttcgaggctggaaaagctgagccagttgaacccccagcta
tgtcaggccggcgacccggttttgatagcggaattcctccctccgctccttgacctccac
tcggatcgctccagtccagttcgcaagctcatcgcagagacaattggtgatataggatta
aagcatatggaattcatccctgatattgcacctattttgatgactgtgctgaaagatggc
acaccagcagttgctagacaggccatcgcttctggaattgatttatttcgttccactctt
gtaaaagttgcaatccagggtttatactccagtgagttggatgactgccttgaatcatca
tggacatgggtgctaaagcttagggatgaaatatactcaatagccttccagccgaggaat
gacggaacgaggttgctagcactaaagtttgttgaagcagttattcttctttatacacct
gatccaagcggctcctcagagcctccttctcagttagattctgaaggagattttgagttt
aacatatcatggattcgtggaggacatcctgtactaaatgttggagatttatcaattgaa
gcaagtcagaatttgggtttattgcttgatcagctgagattaccgactgtgaaatctctc
aataactcaatgattattgtgctcattaatagtctttcatcaattgcaaaaggaaggcct
gccttttatggtcgcattcttccagtcttgcttggtttagatccctccagctctctcaac
aaaagagtgccagtttttggggtgcatcatgctttaaagaatgcttttctttcctgcttg
aaatgtacacacccaagtgctgcaccgtggcgggatcgtctagttgctgcactcagagca
atgaaagctggagtttctgtggaacaagctcttcaacaagtctaccagatcaatggaagt
gtagaacagaaagatgatttgcaagttacccaagagaagaagccttcaattaaaggagat
gatgctgtgcatgctaatgctgggaggaaaagggctggtgtgctggatgctagagacttg
gttgaagaatatgatgggtctggaaagcgtgcctgtctaacacctactgcttcagagaaa
ttggagcaagacttaaatagggaccaggatgacatcccttctaggggagtatctcgagga
gatggagataatggaccagtccagcaacttgttgccatgtttggtgcattggttgctcag
ggtgagaaagctatggtatcactagagattcttatctctagtatctctgctgatttgcta
gctgaagtagttatggctaatatgcggcaccttcctcccaatcagcctacaactgaagac
aatgatgattcattgggttcttgtccaaatattgctggctacgataatcaattcagaaat
ctgtcatcaactttgaaagagatgctttccacttctaatgtagctacacagatggattct
gtgtcagatgccgagcaatctcaatccactgatgtagagataaatcggggaaaggaggaa
aggccattagtgactgtggccgataatgattttgtatcttctgatgtacatcatggagtt
gaacaagcattggtacctgtaccagtttcttcttccggtgaagttccatctgcaacttta
aatggtttttcagctcttccatccaaagtccttgatgttgcaaatctagagagtgagata
ccaggtctggattcaactgctcgcagtgatggacttgctgaaacactagtttcatcactg
ccacctatggatatggaagatgctagtcaagagcaagttagtagtttgggtaggttatca
gtggatctagttccgtcaatgtcaactgataggtctgaagaacttagtcccaaagcagct
gtcacagatgtaagcagcattaactcctcaacggcaacttctgttggattgcccattcaa
tttatgctgcccaaaatgtcagccccagttatcaatcttgctgatgaagacaaggaccaa
ttgcaaaaattggctttcattcgtattgtggaggcatataaacaaatagcaattgctgga
ggttcacatgttcgattttctttgcttgcctatttgggggctgagtttcctcttgacttg
gatccgtggaatgtactacaaaagcatatattgtcagattatatgaatcatgagggacac
gagttgacattgcgtgtgctctacaggttatttatcgaagcagaagaagaacaagacttc
atttccttcaccactgctaaatcagtatatgaaatgttttttctcaatgtggcagaaaca
cttagagattcttttccagcctctgacaaatccttaagtagattgcttggtgaagctcct
tatctccccaattctatttttaaacttttagagagcttatgttctcctggaagcagtgat
aaagctgagaaggactcactcagtggagatcgagttcatcaaggtctcagtactgtgtgg
agccttattttgctacggcctgccattcgtgatgtctgtttaagaattgctttacagagt
gcagttcatcacctggaggaagtacgcatgaaggcaatacgcctggtggcaaacaagctc
tatcctttatcatcaatttcccaacaaatagaagattttggaaaggaaatgctctactct
gtaactaaaggtgattatatgatgggcagaattgatggcgacagatctgaaataccaaag
gattccaacttggacaaaccttcaatagaacaaccttcagtggcacccatcagcaaagat
aactcctctgatgcctctcaattaggcgtaccccagaacttatcaacttcattaactgag
gctcagcgttgcatgtcactttattttgccctgtgcactaagaagcacaccctttttcgt
gagatatttgtagtctataaaagcacatcagatgcagtaaagcaggcagttcataaccaa
atcccaatactagttcgcacaatcggctcatcatctgaacttcttgaaattatttcagat
ccaccaactggaagtgagaaccttttattgcaggttttgcatacattgacagatgggata
gttccttctccagaactagtgttgacaattaaaaagttatatgatacaaaagtaaaggac
atagaagttctaattccagttttgtcatatttaccaaaagatgaggttttggtgattttc
ccacatcttgttaatcttcccttggataagttccaagttgcacttggacgtgttctccag
ggttctcattctggtcaagttctatcgccagctgaagtactaattgctatccatggaatc
gatcctgacaaggacaaaattcccttgaagaaggtcacagatgcttgtaatgcttgtttt
gaacaaaggcagatattcacccaacaagttcttgcaaaggtcctgaatcaattggttgag
cagattcctcttcctttgttgttcatgcggacagtcttacaggctataggtgcttttcca
gccttggtggagttcataatggaaatcctttctcgtcttgtgaacaaacagatttggaag
taccccaagttgtgggtaggattcttgaagtgtgctctcttaacaaagcctcagtcattc
agtgtgttgctccagctacctccagcacagcttgaaaatgcattgaacagaacagcagca
cttaaggctcccttggttgctcatgccaaccagccaaacatacgtgctacacttccaagg
tctacattggcagttctgggaatcgcatcagattcacagaattttagtcaaccgcaaact
actccagctcgtactgcagatacaggcaattcagataaggaagcagtaactgaaaaaccc
aaagaatcatctagcgccagttaa
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integrated database retrieval system
