Diospyros lotus (date-plum): 127791420
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Entry
127791420 CDS
T10632
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00750
Vitamin B6 metabolism
dlt01100
Metabolic pathways
dlt01240
Biosynthesis of cofactors
Module
dlt_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
127791420
Enzymes [BR:
dlt01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
127791420
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
His_biosynth
Motif
Other DBs
NCBI-GeneID:
127791420
NCBI-ProteinID:
XP_052177253
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Position
1:32201714..32203013
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AA seq
310 aa
AA seq
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MAGSGVVTVYGNGAITETTKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE
SEVLTLADDDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRLLRNMDDDEVFTYAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDD
KVERYANRSE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagcggagtggtgacggtgtacggaaatggcgcaatcaccgagacgacgaag
aaatcgccgttctcggtgaaggtagggctggcgcagatgctgcgcggcggagtcatcatg
gacgtcgtgaacgccgagcaggcgcgcatcgccgaggaggccggcgcctgcgccgtcatg
gcgctggaacgcgtgcctgcagacattcgggcgcagggaggcgtggcgcggatgagcgac
ccgcagctaatcaaggagatcaagcaggcggtcacgattcctgttatggcgaaggctcgc
atcggccatttcgtcgaggctcagatcctggaagccatcggcatcgactacgtcgacgaa
agcgaggtcctcaccctggccgacgacgacaaccacatcaacaagcataacttccgcatc
cccttcgtttgcggctgccgcaatctgggcgaggccctccgccgcatccgcgagggggcg
gcgatgatccgtaccaaaggcgaggccggaaccggcaacatcatcgaggcggtgaggcac
gtgcgctccgtgatgggcgacattaggttattgcggaacatggacgacgacgaggtcttc
acgtacgccaagaaaatcgctgccccctatgacctggtgatgcagaccaaacagctcggg
aggcttccggtggtccacttcgccgccggcggtgtcgcgaccccggccgacgcggctctg
atgatgcagcttggctgcgacggggttttcgttggctccggtgtgttcaagagcggtgac
ccggcgcggcgcgctcgggcgattgttcaggccgtgactcactacagtgacccggatgtc
ctggccgaggtcagctgcggtttgggcgaggctatggttgggataaatctaaacgacgat
aaggtcgagaggtacgccaacaggtcggagtga
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