Diospyros lotus (date-plum): 127791568
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Entry
127791568 CDS
T10632
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dlt Diospyros lotus (date-plum)
Brite
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127791568
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127791568
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
127791568
microRNA pathway
RISC loading complex
127791568
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127791568
NCBI-ProteinID:
XP_052177510
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Position
1:27165284..27173742
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AA seq
984 aa
AA seq
DB search
MSGRGHSGGGAGGRGGGRGRGRGQGQGQHRGGGRSAGGRGGSAPYQPGPPPTRQPPSNVA
PHPGFPSSSSIAGPSTGPTAASLAGEMERKMTIQTGPSQPPASQPGTPAQQPAPPSQEIQ
APSQLPPSSSKSVRPPARPGFGTVGTKCVVRANHFLVNVVDKDLHHYDVTISPEVISKKV
CRDIVNQLVTMYRASHLGNRQIAYDGSKSLYTPGALPFSSKEFVVKLVDNDVPSRREREF
KVAIKFAAKAEIYQLQEFIRGRCLDSPQDTIQVLDVALRSRPSNKYSVVGRSFFHPSLGE
GGSLGDGLEYWKGFYQSLRPTQMGLSLNIDVSARAFYEPILVTDFVGKYFNIRDITRPLS
DQDRVKVKKAMKGVKVVVTHRQDVRKYKISGVSGIPTSQLTFTDDTGKKVSVVQYFKERY
NTNIRFGSLPALQAGSDSKPVYLPMELCRIVDGQRYSKKLKEKQVTALLRATCQRPHDRE
ASICKMVRQNDYNSDEVARGFGVNVGTELTSIQARVLPAPMIQYEGSQEAPRVGAWNMID
KRMFNGARVEFWTCVNFSRLRNNEASNFCDRLLDMCVRKGMDFSSTPLLPFSSAHPGQIE
KTLSDIHSQSVERLRSLGHTGKHLQLLIIILPDVTGNYGKIKRVCETELGIVSQCCQPMQ
AVKCKEQYLENVALKINVKVGGRNSVLLNTAANLPFVTDTPTIIFGADVTHPQPGEDSSP
SIAAVVASMDWPQVTKYRGLVSAQPHREEIIQDLYKTHEDPRRGKIHSGMIRELLIAHFR
STNRKPARIIFYRDGVSEGQFNQVLLHEMDAIRQACVSLEERYLPRVTFVVVQKRHHTRL
FPAQHGDRRSTDRSGNILPGTVVDRQICHPSQFDFFLCSHAGIMGTSRPTHYHVLYDENG
FNADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDASDSGSTGGETSS
RDRNVAVRQLPSIKENVKDVMFYC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccgaggacatagcggaggcggcgctgggggccgagggggcggcagaggccga
ggccgaggccaaggacaaggccagcatcgcggtggaggaagaagtgccggtggcaggggc
ggatcggcgccgtaccagcccgggcctccgccgacgaggcagcctccttcgaatgtggct
ccccatcctggatttccatcgtcgtcatcgatagctggcccttccaccggtcctactgcc
gcgtccctcgctggggagatggagcgaaagatgacgattcaaactgggccctcccagccg
ccggcttctcagccggggacacctgctcaacaaccggctccaccgtcacaagagattcaa
gcaccgtctcagctgcctccgtcgtcttccaaatctgttcgcccaccggctaggcctggt
ttcggtaccgtgggcaccaaatgtgttgtccgcgccaatcactttctggttaatgtcgtc
gacaaggatctacatcattacgatgtaacaatcagtccagaagtgatatcgaagaaagtt
tgcagggatattgtcaatcagctggttacaatgtaccgtgcatcacacttgggcaacagg
caaatagcctatgatgggagtaagagcttgtatactccaggtgctttgcctttctcctca
aaagaatttgttgtgaagctagttgacaatgacgtgccctctaggagggaacgtgagttc
aaggtggcaataaaatttgctgcaaaagctgaaatttatcaattacaagagttcatacgt
ggtcgatgtctggattctccccaggacaccatacaggttcttgatgtggctctgagatca
cggccttccaacaagtattcggttgtgggacgatctttctttcaccccagtctaggtgag
ggtggcagtcttggtgatggcttagagtattggaaaggtttctatcaaagccttcgacct
acccagatgggtctttctcttaatattgatgtatctgccagagcgttctatgaaccaatt
ctggttactgattttgttggaaaatattttaatattagagatattactaggccactgtcc
gatcaagatcgtgttaaggtcaagaaagcaatgaaaggtgttaaggtagtagttacacac
agacaggatgtaaggaagtacaaaatatctggtgtgtcgggtataccaactagtcaatta
acgtttaccgatgacactggcaaaaaagtatctgttgttcaatacttcaaagaaagatat
aacaccaacattaggtttgggtctttgcctgctcttcaagctggaagtgactcaaagcct
gtgtacctacccatggagctatgtagaattgttgatggccagagatactccaaaaagttg
aaagagaagcaggtcactgctctgttacgggcaacatgccagcgtcctcatgatagggaa
gcaagtatttgcaagatggttaggcagaatgattacaattctgatgaggtagctagagga
tttggggttaatgtaggcactgaacttacatcaattcaagctcgagttcttcccgctccc
atgatccagtatgagggatcccaagaagctccacgggttggcgcttggaacatgattgac
aagagaatgtttaatggggctagggttgaattttggacgtgtgtgaacttctcaagacta
agaaataacgaggcttctaatttctgtgaccgtttgcttgacatgtgtgttaggaaaggg
atggatttttcctcgacgccattattacccttctcttcagcacatcctggccaaattgaa
aagactctttcggatattcattcccagtctgttgaacgtcttaggagcctaggacatact
gggaaacatcttcagttgttaattattattttgcctgatgtcactgggaattatggaaag
ataaagcgtgtgtgtgaaactgagctgggaattgtctcccagtgttgtcagcccatgcaa
gctgtgaaatgcaaagaacagtatcttgaaaatgttgcattgaagatcaatgttaaggtt
ggtggaagaaacagtgtgttgttgaataccgcagctaacttacccttcgtaactgataca
cccaccataatatttggtgctgatgtgactcatcctcaacctggagaggattctagtcct
tccattgctgcagtggtggcatcgatggactggccacaagttacgaagtaccgaggattg
gtttctgcacaaccacatagggaagaaattattcaggacctttataagacccatgaggat
cctcgcagaggaaagattcacagtggcatgattagggaactattaattgcgcatttccga
tcaactaatcggaaacctgcgagaatcatattctacagagatggtgttagtgaaggacaa
ttcaaccaagttctgttacatgagatggatgccattagacaggcttgcgtgtctttagaa
gaacgatatctgccacgagttacttttgtggtggtacaaaagagacatcatacccgtctc
tttcctgctcaacatggggatcgcagatccaccgacaggagtggcaatattttaccagga
acggttgtggaccgacaaatttgtcaccccagtcagtttgatttcttcttatgcagtcat
gctggtattatgggaacaagccgacctacgcactaccatgtgctttatgatgagaatgga
ttcaatgctgatgctttacaaattctgacgaacaacttgtgttacacgtatgcaaggtgc
acccgatcagtttctattgttcctccggcatattatgcccatctggcagcttttcgtgca
cgctactatattgaaggtgatgcatctgatagtggatcaactggtggagagaccagcagc
agggatcggaacgtggcggtacgacaacttccttcaatcaaggaaaatgtgaaagacgtg
atgttttactgttga
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