Diospyros lotus (date-plum): 127791814
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Entry
127791814 CDS
T10632
Name
(RefSeq) ABC transporter F family member 1-like isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlt03009
]
127791814
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127791814
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_14
RsgA_GTPase
AAA_28
AAA_33
AAA_15
AAA_30
AAA_22
AAA_24
MukB
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
127791814
NCBI-ProteinID:
XP_052177876
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All DBs
Position
1:27987040..28000292
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AA seq
593 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAATAVASSKAAAASNLASGLQAIQISDRTCTGVLCS
HPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIP
EHMDIFHLTREIEASDMSALQAVINCDEERVKLEKEAEALIGQEDGGGETLNRIYERLEA
IDASTAEKRAAEILYGLGFSKKMQEKRTRDFSGGWRMRIALARALFMNPTILLLDEPTNH
LDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKPYTGNYDQYVQTRS
ELEENKMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRD
RVLVFRFPDVGNLPPPVLQFVEVTFGYTPENLIYKNLDFGVDLDSRVALVGPNGAGKSTL
LKLMTGELIPLDGMVRRHNHLRIAQFHQHLTEKLDLEMSALQYMIKEYPGNEEDRMRAAI
GRFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALN
EWDGGMVLVSHDFRLINQVAHEIWVCQNQTVTRWEGDIMGFKEHLRSKAGQSD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagacgccagcaagaagaaggccgcccagaagaaggcggcggcggcggcgaag
agaggtgggaaggctgccactgctgtggcatcatcgaaggcggcggcggctagtaacttg
gccagtggtttgcaggcaattcagatatcggatcggacttgtacaggggtgctctgttct
catcctctgtccagagatattcggatagagtctctatcgctaactttccatggacacgac
cttatagttgattctgaactggaactcaattatggcagacgttatggtttgcttggattg
aatggctgtgggaaatctacgctccttgctgcaataggatgccgagagcttcccattccc
gaacacatggatatttttcaccttaccagagaaattgaagcttctgacatgtctgcactt
caggctgtcataaattgtgatgaggagagggtgaagttggagaaagaagctgaagctttg
attgggcaggaggatggtggtggagaaactcttaaccgcatttatgaacgtttggaagct
attgacgcctcaactgcagagaaacgtgctgcagagatcttgtatggtcttggtttcagc
aagaagatgcaagagaagagaacgcgtgatttctctggtggctggagaatgagaattgct
ttagcacgagctctatttatgaatccaactatcttgttgctcgatgaacccaccaatcac
cttgatcttgaagcttgtgtatggttggaggaaactctgaagaaatttgaccgcattttg
gttgtggtttctcactctcaggacttcttgaatggtgtttgcactaacatcatccacatg
cagaataagaaattgaagccttacacaggaaactatgatcagtatgttcaaactcgctct
gagctggaagaaaacaaaatgaaacaatacaagtgggagcaggaacagattgcttcaatg
aaggaatatattgcccgatttggacatggatcagcaaaattagcccgtcaggcccagagc
aaagagaaaacactagcaaaaatggaacgaggtgggctgacagagaaggtggtgagagac
agggttctggtttttcgatttcctgatgtaggaaatcttcccccgcctgtattacagttt
gtggaagtcacatttggttacacacctgaaaacctgatctacaagaatctcgactttggg
gtagatttggactcaagagtagctcttgtgggaccaaatggtgctgggaagagtacattg
ctgaagctgatgacaggtgagttgattccccttgatggcatggtccggcggcacaaccat
ctaaggattgctcagttccatcaacatttgacggagaaacttgacctggaaatgtctgct
ctgcagtatatgataaaagagtacccaggaaatgaggaagaccgcatgagagcagcaata
gggaggtttgggctctcgggcaaagcccaggtgatgcccatgaaaaatttgtctgatggg
cagcgaagccgtgtgatttttgcatggttggcatggagacagccccatatgctgttgctg
gatgaacccacgaatcacttggatattgaaaccatcgactctctggctgaggcattgaac
gaatgggacggtggtatggttcttgtaagccatgacttcaggctcattaaccaggtagct
catgagatatgggtttgtcaaaatcaaactgtgacccggtgggagggtgatattatggga
ttcaaggagcacttgaggagcaaagccgggcaatctgattga
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