Diospyros lotus (date-plum): 127791926
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Entry
127791926 CDS
T10632
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127791926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127791926
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127791926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
127791926
NCBI-ProteinID:
XP_052178071
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All DBs
Position
15:complement(29775292..29780653)
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AA seq
473 aa
AA seq
DB search
MQSDLGKLFVGGISWDTNEERLKGYFSSFGEVLEAMIMKDRSTGRARGFGFIVFADPAVA
EKVIKEKHSIDGRMVEAKKAVPRDDQSTMSRSSSSIQGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLRTFHELNGKMVEVKR
AVPKELSPGPTRSPLGGYKYSLSRVNNFLSDYSQGYSPNAVGGYGLRMDGRFNPIPGDRS
GFAASFGSGYGMGLNFEPGLNPNFGGSANFNNALDYGRGMNPYYISNSNRFSNPVGYDGG
NGGNASFFSSGTRNLWRNGGLNYGTNSAGSSAYIGSGSGSIGGAFADGGLSWGSTPISPQ
GGGNISNHGGNLGYRVGNSSYDLGGGSYGRNAATNGPPSSSYATSNGGDAAFGDFYGGNS
VYGDWLSKDSEIEASASFGFGLGNGISDGPVESSPSYVGGYSTKRQANRGFVG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatcttgggaaattgtttgttggtggaatttcttgggacacaaatgaggaa
cgcctcaaggggtacttcagtagttttggagaagttctggaggcaatgataatgaaggat
cgaagcacggggcgcgcccgtggcttcggtttcattgtctttgctgatccggcagtggca
gagaaagtcattaaggagaaacacagtattgatggtaggatggttgaggcaaaaaaggct
gttccaagggatgaccagagcaccatgagtagaagcagtagcagcattcagggttctcct
ggtccaggacgcactaggaagatatttgttggaggattggcttcgacggtcacagaaagc
gacttcaagaagtattttgagcagtttgggactatcacagatgttgtggtgatgtatgat
cacaacactcagaggccaagaggctttgggtttatcacgtacgattcagaggatgcggtg
gacaaagtgttgcttagaactttccatgagctaaatggtaaaatggttgaggtcaagcgg
gcagtccccaaagagttgtcgccaggtcctacccgaagcccacttggtgggtataaatat
agcctgagtagggtcaataacttcctaagtgactatagtcaagggtactctccaaatgct
gttgggggttatggcctgagaatggatggcaggttcaatccgattcctggtgatcgaagt
ggatttgctgcttcatttggttctggttatggaatgggtttgaacttcgaaccagggttg
aacccaaattttggaggaagtgcaaatttcaacaatgctctcgactatggacggggaatg
aatccttattatatcagtaattcgaacaggttcagtaatccagttggatatgatggaggg
aatggtggaaatgcttccttttttagctccgggactcgaaatttgtggaggaatggaggg
cttaattacggaacaaactcagcaggctcgagtgcctatattgggtctggaagtggaagc
attggaggtgccttcgctgatggggggcttagttggggttcaactcccatttctccccaa
ggtggaggtaacatttctaatcatggtgggaatcttggttaccgtgttggtaatagcagc
tatgatttgggagggggaagctatggaagaaatgctgcaactaatgggcccccttcatca
tcctatgctacatcaaatggcggtgatgcagcttttggagacttctatggtggtaattca
gtttatggggattggctgtcaaaagactctgagatagaggcatctgcttcatttggcttt
gggctcggcaatggaatttctgatggtcctgtggaaagttccccaagctatgttggtggt
tatagtactaagaggcaggcaaacagaggattcgttggctag
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