Diospyros lotus (date-plum): 127791927
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Entry
127791927 CDS
T10632
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127791927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127791927
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127791927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
AAA_11
Motif
Other DBs
NCBI-GeneID:
127791927
NCBI-ProteinID:
XP_052178072
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Position
15:complement(29753701..29764894)
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AA seq
465 aa
AA seq
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MQSDLGKLFVGGISWDTNEERLKEYFSAYGEVLEAVIMKDRSTGRARGFGFIVFADPSVA
ERVTKEKHSIDGRMVEAKKAVPRDDQSTMSRSSSSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEAAVDKVLLRTFHELNGKMVEVKR
AVPKELVQDPTRSPLGGYNHGLSRINSFLSGYTPGYSPNTVGGYGPRMDGRLNPIIGGRG
GFSAVGSDYGMGLNPNFGGSANFNSTLSYGRGLSPYYVGNSNRFTTPAGFDAGNGGNTSF
FSSGTRNLWGNGGLNYGTNSTSSNAYMGSGSGTIGGTFANSGVGWGSSPISLQGGGNVSG
HGGNLGYSVSNNSYALGGGGYGRNSATNAPTSSSNSSGGALTDFYSSSSVYGDPAWLLKE
PEREGSGAFGFGLGSGVSDAPMESSPNYVGGYGISKRQPHRGFAG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatcttggaaagttgtttgttggtggaatttcgtgggacaccaatgaagag
cgcttgaaggagtacttcagtgcatatggggaagttttggaagcagtgattatgaaggat
cggagcaccgggcgtgcccgaggttttggttttatcgtctttgctgatccttcagtggca
gagagagtgactaaggagaaacacagtattgatggtaggatggttgaggccaaaaaggct
gttccaagggatgaccaaagcaccatgagtagaagcagtagtagcattcatggctctcct
ggtccaggacgtacgaggaagatttttgttggaggtttggcgtccacagtcacagagagc
gactttaagaagtattttgagcagtttggtaccattacagatgttgtggtgatgtacgat
cacaacactcaaagaccaagaggctttggattcatcacatatgattcagaggctgcagtg
gacaaagtgttgctaagaactttccacgagttgaatggtaaaatggttgaggtaaagcgt
gcggtcccaaaagagttggtgcaagatcctacccgaagtccacttggtggatataaccat
ggcttgagtaggatcaatagcttccttagtggatacactcctggatactctcctaataca
gttgggggttatggtcctagaatggatggcagactcaatccaattataggtggtcgaggc
ggcttttctgcagttggttctgattatggaatgggtttgaacccaaattttggaggaagt
gcaaatttcaatagcactctcagctatggtcggggattgagcccgtattatgttggtaat
tcaaacagatttaccactcctgctgggtttgatgcggggaatggaggaaacacttccttc
tttagctcagggactcgaaacttgtgggggaatggagggcttaattatggaacaaactca
acaagttcaaatgcctatatgggatctggaagtggaaccattggaggtacctttgccaac
agtggagttggttggggttcatctccaatttcactccaaggtggtggtaatgtttctggt
catggtgggaatctcggttacagtgttagtaataacagctatgctttaggagggggcggt
tatggaagaaatagtgcaactaatgcacccacctcatcatcaaatagcagtggtggggct
ctcacagacttctacagtagtagttcggtttatggggaccctgcttggcttttaaaagaa
cctgagagagagggatcaggtgcatttggttttgggcttggcagtggagtgtctgatgct
cctatggaaagttctcctaattatgttggtggctatggcatttctaagaggcagccacat
agaggatttgctggctag
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