KEGG   Diospyros lotus (date-plum): 127792038
Entry
127792038         CDS       T10632                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127792038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlt03019]
    127792038
   03041 Spliceosome [BR:dlt03041]
    127792038
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127792038
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127792038
Spliceosome [BR:dlt03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127792038
SSDB
Motif
Pfam: RRM_1 RRM_7 FANCI_S1-cap
Other DBs
NCBI-GeneID: 127792038
NCBI-ProteinID: XP_052178290
LinkDB
Position
15:33095865..33111066
AA seq 434 aa
MNILMEMDPTKKRKLDGNGAVQTASDAVPGQLTVDDVRKIIELFTNDQLLEIVQNAAVRH
AEVLEAVRSIADRDPAQRKLFVRGLGWDTTTEKLRAIFAAYGDIEEAVVILDKGTGKSKG
YGFVTFKHVDGALLALKEPSKKIDGRMTVTQLASAGVQGQNANSGVDVSMRKIYVANVPY
DMPAERLLAHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTAEAARASLVDPIKTIDGRQ
LNCKLAIEGKKGKPGVPGDAQGDGLGMHSHSTVSGSLGPGQYGGPGGSYGGFSGGLQGLP
PGHLPLNSSLGGSQAPSSMGAGGGYGSGLGGQYGGSHYGGPASAGYGGMGGAGSSGGMGG
AGGGLGGTGPAARGSSSYGLPPSSGGMPSSGYPDGAHYGFSSSAYASQHHQPTGTSPVPR
VPPGGVYQGAPQFY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaatatcctgatggagatggacccaaccaagaagcgaaagctagacggaaacggcgct
gtacaaacagcatccgacgccgtaccgggccaactcaccgtcgacgacgtacgaaagatc
atcgagctattcactaacgatcagctcctcgagatcgtccaaaacgctgcagttcggcac
gccgaagtcctggaggcggtccggtcaatcgccgatcgggatcccgcgcagcggaaactt
ttcgtccgcggcctcggatgggacaccaccaccgagaagctgcgcgctatttttgctgcc
tatggcgatatcgaagaggctgtggtgatactggacaagggcaccgggaagagcaaagga
tatggcttcgtcacgttcaagcacgttgacggagctttgttggctttgaaggagcctagt
aagaaaattgacgggcgaatgacggttacgcagcttgcatcagccggagtccaaggacag
aacgcgaattcgggcgtggacgtgtcgatgaggaagatctatgtggcgaacgtgccgtat
gatatgcctgcggagaggctactggcgcattttttgtcttatggagagattgaggaaggg
ccgttgggtttcgataaggcgactgggaagtcgaaagggtttgctctgtttgtgtacaaa
acagctgaagctgctagagcatcgttagttgatccaatcaagacaattgatgggcgtcaa
ttgaattgcaaattggcaattgaagggaagaaagggaagccaggggttcctggcgacgca
cagggtgatgggctagggatgcattcacattctacagtttcgggttcacttggcccagga
cagtatggcggacctggtggttcctatggtggattttctggtggactgcagggtctgcct
cctggtcatctccctctaaattcatcgctaggtggcagtcaagcaccatcttctatgggt
gctggtggcgggtatggctctgggttgggcggtcagtatggaggttctcattatggtggg
cctgcttctgctggatatggaggaatgggtggtgctggtagcagtggtggtatgggtggt
gcaggaggcgggttgggtggtacagggcctgctgctcgtggttcttcatcgtatggtttg
ccaccaagctcaggtgggatgccttccagtggttatcctgatggtgctcactatggcttc
tcatcctctgcatatgcaagccagcatcatcaaccaacaggaacatcaccagtaccccga
gttccacctgggggagtgtaccaaggtgccccccaattctactga

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