Diospyros lotus (date-plum): 127792154
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Entry
127792154 CDS
T10632
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127792154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127792154
NCBI-ProteinID:
XP_052178508
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Position
15:15301797..15421130
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AA seq
2079 aa
AA seq
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MPLFLSDEEFERCSQDASLVAEKADAFIRELYNQLETAKAQADAAAITAEQTCSLLEQKY
VSLSSEFAKLESENSQLNSTLEQRLSDLAQAQAQKHQIHLKSIEKDGEIERLSTQASEFQ
KSKRQLIDLLEQKDVEISEKNATIKSYVDKIVNLTDSAASREARLNEIEAELARSRASCA
RLTQEKELIEKHNAWLNDELTTKVSNLIELRSTHNELEANMSAKTADFERKLNESLSSLK
WNKDRVVELEEKLTLMQEELSSSKDGAAAREEQYSAEISTVTKLVELYKESSEEWSKKAG
ELEGVIKALETHLSQVENNYKERLQKEISAKEECHKEAAYLKEKLEKCEAEVETRRKASE
LNLLSLTGLTETWVDSVEGNDTVGDNLKVVPSIPVGVSGTALAASLLRDGWSLAKMYAKY
QEAVDALRHEQLGRKQSQAILERVLYEIEEKASVILDERVEHEKLVEAYSAVNQKLQQSL
SEQIHLERTIQELKADLRRRERDCSLAQKEITDLQKQVTILLKECRDVQIRCGSAGPDYI
NDITISPVVELSVDSDAEKIISERLLTFKDINGLVEQNVELRSLVRSLSDQIESREMELK
EKFEVELQRHTDEAAAKVNAVLARAEEQGKMIESLHTSVAMYKRLYEEEHKLQLHSTHSR
TAEASAGSQDVGKNDLVLLLEGSQEATRKAQEETSERMRHLEEDLRKVRSEMISLRSERD
KLELEANFAREKLDRFMKEFEHQREETNAVISRNVEFSQLIIGHQRKLREGSESITAAEE
FSRKLTMEVSMLKQEKEMLTHAEKRACDEVRGLSERVYRLQASLDTIQSAEEVREEARRA
ERRKQEEYVKRIEKEWAEAKKDLQEERDNVRRLTLDREEIMKNAMKQVEEMGKELANALS
SGSAAEARAAVAEARYLELEKKIKSPEAKVFLIGGEHGENGISPSSSTEVIADLAIAKEE
IQKLREEAQVNKDHMMQYKSIAQVNEAALKQMEIAHENFKNEADKVRMSLEAELLSVREH
ISELESEYSSKSKEGASLLADREGALASAISEIDHFKQENSLKMSQISTMEVQISALKED
LEKEHQRWRDAQTNYERQVILQAETIQELTKTSQSLALLQEETSELRKVTDALRTENKEL
KGKWEVEKSMLEELKNVAEKKYNEINEQNTILHSRLEALHIKLAEKDHVSAGLSSGSTSH
DPLRDDGLQNVVNYLRRSKEISETEISLLKQEKLRLQSQLEGALKAAETAQASLTSERAN
SRATIFTEEEFKSLQLQVREVNLLRESNVQLREENKHNFDECQKLREAARKARSESEDMQ
KLLRERETELDACKKEIEMQRMEKERLDKRVSDLMERFKSIDVEDYDHMREDVKHLQANL
SEKDALLEELKKLLSEKQVSISELEQDLVKSRAEVNERESRLNDSLQIEASLKSEIEKHK
KLGAQLKKKFENLSKEKEELSKENQALSKQLEDYRQVGRRGMGDAAGEHAMKEKEKEKDT
RIQILEKTVERQREELKKEKDDHKTEKAKRLKTERTILESFKSVNQEKAKLVDGLEKHKH
ALKRLSEEVEKLKHAKGSLPEGTSVIQILSGTLLDDLSASYHLTVENFERVARSVSGDLG
ALSGADISSFMDASPSGVTTGQPVPSQAPTILAPPTGTAGSLPLAKPTDEKEKRFILPKA
NIEARKTGRKLVRPRIVKSEEPHVDPDQMPETEGFNSDGKALTSHNLETQGSLAPVTHTT
ARKRHASSTSSDLPEESLVQRGTGSEMEAPVLKKSKASESQQEGAEVQAITENLEAVPAI
EESPDAIADLSQVLNEEAMEIEKDDIETGEQDEEPKVGGANQIELQNESNDVMEEMVYKK
NEPDGISDDQQKAVTEQDIQQSALEPDIEPEEGELVPEVADSEGGGNTSTMVESQEMVDS
QPEQAPRVSVPIVDEEILIGATVDLGEASSPQVLTDEGDAEANAEGTDNPNDGNNQVLVQ
ADHPNPEAPSDTSERASTVTDAETKQGSPSVATEAQEGKQVSPAGKSSTTINLQERAKQR
SALRQAGVISNSLGRGRGRAGRGRGGRPGRGGQSSGGQG
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcctctctgacgaggagttcgagcggtgctcgcaggacgcctctctcgtg
gcggagaaggccgacgcgttcatacgagagctttacaatcaactggaaaccgccaaggcg
caggccgatgcggccgccatcaccgcggagcagacctgttcgctcctcgagcagaagtac
gtctccctctcctccgagttcgccaagctcgaatcggagaactcgcaactcaactccact
cttgaacagcgcctctcggacctcgcccaagcccaagcgcagaagcatcaaatccatctc
aaatccattgagaaagatggcgagatcgagcggctttctacccaggcttccgaatttcag
aagtccaagaggcagttaatcgacctgttggagcagaaggacgtagagattagtgagaaa
aatgctacgatcaaaagctacgtggacaagattgtcaacctgactgacagtgctgcatcg
cgggaagctcgattgaatgaaattgaggcagagttggcacgttctcgtgcttcctgtgct
cgtcttactcaggagaaagaactcattgagaaacataacgcttggcttaatgatgaattg
acaaccaaagttagcaatctcattgagctccggagcacacataatgaacttgaggcaaat
atgtcagctaagactgcagattttgagagaaaattgaatgaaagtttgagctctttaaaa
tggaacaaggatagagtggtggagctagaagagaagcttacactgatgcaggaggagcta
agctcatctaaagatggtgctgcagccagggaagagcaatattctgctgaaatctccacg
gttacaaagcttgttgaattatataaggagagttccgaggaatggtcaaaaaaggcagga
gagcttgagggagtcatcaaagctttggaaactcatctaagtcaagttgaaaataattat
aaagagaggcttcaaaaggaaatatctgcaaaagaagaatgtcacaaggaagctgcttat
ttgaaggagaaacttgaaaagtgtgaagctgaagttgagacaagaaggaaagcaagtgag
ctgaatcttctttctctgacaggtcttacggaaacatgggtggactcagttgaaggaaat
gacactgttggggacaacctcaaggtagttcctagtattccagtcggtgtttcagggaca
gcattagcagcttcacttctaagggatggttggagtcttgcaaaaatgtatgccaagtac
caagaggctgttgatgcattacggcatgagcaattaggaagaaagcagtcacaggcaatt
ttggagcgggtcttgtacgaaattgaggagaaggctagtgtcattttggatgagcgagtg
gaacatgagaaattggttgaagcatactctgcagtaaaccaaaagctgcagcaatctctt
tctgagcaaattcatttagagaggaccatccaggaattaaaggctgatttgaggaggcgt
gaaagggactgctccctagcacagaaggagatcactgatctccaaaaacaggtgacaatc
cttctaaaggaatgtcgagatgtacaaattcgttgtggatctgctggtcctgattacatt
aatgacattaccatctctccggttgttgagttgagtgttgactctgatgctgaaaaaata
atttctgaaaggctgttgacctttaaggatataaatgggttagttgagcagaatgttgag
ctcagaagcctcgtgcggagcctctctgaccagattgaaagtagagaaatggagctgaag
gagaagtttgaagtagaactccagagacacactgatgaggctgctgccaaagttaatgca
gtactagcgagagcagaagagcaagggaaaatgattgaatcacttcacacctctgttgca
atgtacaaaaggttatatgaggaggaacataaacttcaacttcattcaactcactcccgc
actgcagaagcatctgctggttctcaagatgttgggaagaatgatcttgttcttctgctt
gaaggttcccaggaagctacaaggaaggcccaagaagagacttctgagcgcatgagacat
ctggaggaagatttgcgtaaagtgaggagtgagatgatatcattacgatcagagcgtgat
aagttggagcttgaagcgaattttgcacgcgagaaacttgatagattcatgaaagaattt
gagcatcagagagaagaaaccaatgctgttatatccagaaatgttgagttttcacaatta
ataattggccaccagcggaaactacgtgaaggttctgaatctataactgccgctgaggag
ttctcacgaaaattaaccatggaggtctcaatgctgaagcaagaaaaagaaatgttgaca
catgcagaaaagagagcttgtgatgaagttcgtggtttgtctgagagggtttatcgtttg
caggctagtttagacactatccagagtgcagaagaagttcgtgaggaggctagaagggca
gagagaagaaaacaagaggagtacgttaaacggattgagaaggaatgggccgaggctaag
aaagatcttcaggaagagcgtgacaatgttaggcgtctcacacttgatcgagaagagatt
atgaaaaatgccatgaagcaagttgaagaaatgggaaaagaactagctaatgccttgagt
tctggttccgcagctgaggccagggctgctgttgctgaggcgcgatatttggagttggag
aagaagatcaaatctccagaagcaaaggtatttctgataggtggggaacatggcgagaat
ggaatatctccttcctcaagcactgaggttattgctgacttggctattgcaaaagaggag
atccaaaaattgagagaggaagcacaagttaataaggaccacatgatgcagtataagagc
atagcacaggtgaatgaggctgcattaaagcagatggaaattgcccacgaaaacttcaaa
aatgaggcggataaagtgagaatgtctcttgaagctgaacttttatcagttagagagcac
attagtgaacttgaaagtgaatatagttcaaagtccaaagaaggtgcatccttacttgcc
gatagggaaggggctcttgcttctgctatttcagaaattgaccacttcaagcaagaaaat
tctcttaagatgtcccagatttcgacaatggaagttcaaatttctgctctgaaggaagat
ttagagaaggagcatcagagatggcgtgatgctcaaaccaactatgaacgacaggtcata
ctacaggcggagacaattcaagagctgacaaaaacatcacaaagtttggctttgttacag
gaggaaacatctgaattacgtaaagtgactgatgcactcagaactgaaaataaggaacta
aagggaaagtgggaggtggagaagtcaatgctagaagaattaaagaacgtagctgagaag
aagtacaatgagatcaacgagcagaacactatactgcacagtagacttgaggctctacat
attaaattagctgagaaggatcatgtttctgctgggttgtcctctggaagcactagccac
gatccactacgggatgatgggttacagaatgtagtaaattatctgcggcggtcaaaggaa
atttcagagaccgagatttctttgttaaaacaagaaaaacttcgactgcagtcacagctt
gagggtgctctaaaggcagcagaaacggcacaagcatcacttacttctgagcgagcaaat
tcaagagcaacgatatttactgaggaagaatttaaatctctacaacttcaggttagagaa
gtaaacttgcttcgagaaagtaatgtgcaactcagagaggaaaacaagcacaattttgat
gaatgccagaaattacgcgaagctgctcgtaaagcaagatcagaaagtgaagatatgcag
aaactactgagagagagagaaactgagctggatgcttgtaagaaagaaattgagatgcag
agaatggagaaagaacgcttggataagagggtttctgatttgatggagaggttcaagagt
attgatgtggaggattatgatcacatgagagaagatgttaaacatttgcaggcaaatctg
agtgagaaagatgcgctgctggaggaactaaagaaacttctttccgagaaacaggtttca
atatcagaattggagcaagaccttgtaaagagcagagcggaagtaaatgagagggagagc
aggctgaatgatagtttgcaaattgaggcttctctgaaatctgagatcgagaagcacaag
aagttaggagctcaacttaagaaaaagtttgaaaacttgtcaaaggagaaggaggaactg
agcaaagagaatcaagcactttcaaaacagttagaagactataggcaagtagggaggagg
ggcatgggggatgctgcaggtgaacatgcaatgaaggaaaaggagaaggagaaagacacc
aggatacagattctagagaaaactgtggagaggcagagagaggagttgaagaaagagaag
gatgaccataagacagagaaggcaaagcgtttgaagacagagaggacaatattggagtct
ttcaagtctgtgaatcaggagaaagccaagctggtagatgggcttgagaagcataaacat
gcccttaagaggctgtctgaagaagttgagaagctcaagcatgctaaaggcagccttcca
gagggcacatcagtgattcagatcctttctgggactctattggatgacctttctgcttcc
tatcatctgactgtagaaaattttgaacgtgttgctcgttcagtttcaggcgaccttgga
gctctgtctggggcagacatttcctcatttatggatgcatcaccttcaggagtcaccaca
ggtcagccagttccttctcaagccccaaccatcttagcgccaccaacaggcactgcagga
agtttgccattggctaaaccaacagatgaaaaagagaagagatttattttaccaaaagca
aatattgaagcccgtaaaactgggaggaagttggtccgacctcgtattgtgaagtctgaa
gagccccatgtagatccagatcagatgccagaaactgagggtttcaacagtgatggaaag
gctctgacctcccataacttagaaactcaaggcagccttgcgccagtaacccatacaact
gctcgcaaacgtcatgcttcttctacgtcttctgacttgcccgaagagtcgcttgttcaa
cgtggcaccggctctgagatggaagcccctgtgctgaagaaatctaaagcctcagaatct
caacaagaaggtgctgaagtgcaagctattacagaaaatttggaagctgttcctgcaata
gaagaatctccggatgccattgctgatctgtcccaagtgctaaatgaggaagctatggag
atcgagaaggatgacatagagactggggagcaggatgaggagccaaaagttggaggtgca
aatcaaattgagttgcagaatgaaagcaatgatgttatggaggaaatggtctataaaaaa
aacgaaccagatgggatatcagatgatcaacagaaggctgttaccgagcaggacatccaa
cagtcagcactggagccggacattgagccggaagagggagagctggtccctgaggtggca
gattctgaaggtggtggtaatacatccaccatggtagagagccaagaaatggtagacagc
cagcccgagcaggcacctcgtgtgagtgtacccatagtcgatgaggaaattctaattggt
gctactgtggacttgggagaagctagttctccccaagtcctaactgacgaaggcgatgca
gaagcaaatgccgagggcacagacaatccaaacgatggtaacaaccaggttttagtgcaa
gcagaccacccaaaccctgaagccccttcagataccagtgagagagcatcgacagttact
gatgcagaaactaaacaaggtagcccgagtgtcgcaacagaagcgcaagaaggaaaacag
gtatctcccgcaggtaagagctcaaccactattaatttgcaagagagggcaaaacaaagg
tctgcactgaggcaagcaggagtgatttctaattcactgggtagaggccgaggaagagca
ggccgtggccgcggtgggcgtcccggacgcggcggccagagctccggtggacagggctaa
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integrated database retrieval system