Diospyros lotus (date-plum): 127792439
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Entry
127792439 CDS
T10632
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
127792439
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127792439
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127792439
NCBI-ProteinID:
XP_052178886
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Position
15:complement(6004014..6016706)
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AA seq
720 aa
AA seq
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MKKQWVVKALYETLTLPLKQSPFAANSSSRYICSSPPSIFALKNVTKSNFEPALADLRGL
VRDADFVSIDLEMTGVTSAPWRESFEFDRFDIRYLKVKDSADKFAVVQFGVCPFRWDASN
HSFVAHPHNFYLFPRQDIPVDSPSYEFLCQTASIDFLAKYQFDFNLCIREGISYLSRGQE
DEALRRLDVVYNNESFDLGFNSGEARDTLVVRIADIFFTERLRNRIGEWRDGLLQNKNGE
YRIQESINDSSQQFQTIFFNMRPAILLSGFTSHQLRLIQLVTEKHFQDLVYLCAKDEASS
VQQLIVYIDSKTDRSLLMKEVKEGLRRQAEMKIKAAVGFRHVIDLLSSEQKLIVGHNCFL
DIAHIHRKFLGPLPSTAEEYTSSIHKYFPYIIDTKILLNTSGVIRPMRKGSTSLSRAFTQ
LYPEIASSVKRSHLDLKPRVRVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFIQTCSHL
GLDFNLHSPFTNSANADKLQKHMNLLYLSWTNGDIIDLSTGNRTAESLYHSLHSHPKIIF
SNIALIWGFLPKLKAREIKECISKVFGPNSVTSVYHLDVTAVFVQFSKAELVSDFLQLKE
TLERSNDPISVLHPLSKLLEGGNTCAATYKFYKKVCSSPVSEFMFADQAEAMGIKWKNEL
TGLNAQVGTPQENDMAASPSTANESQSGKLNNLINDLSRGHFRDDENIHSWYPAEAQASK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaatgggtcgttaaggccctctacgaaaccctaaccctaccgttaaagcaa
tctccatttgccgccaattcctcttcacggtatatttgctcttcgccgccctccattttc
gctcttaagaatgtcaccaaatcgaacttcgagccggcgctcgccgacctccggggcctc
gtcagggacgccgacttcgtgtcgatcgacctggagatgactggcgtcaccagcgccccc
tggagggagtccttcgaatttgaccgcttcgacattcgctatctcaaagtcaaggactcc
gccgacaagttcgccgttgtccagttcggcgtttgccccttccgctgggacgcctccaac
cactccttcgttgctcacccgcacaacttttatttatttcctcggcaagatattccagtt
gatagtccatcttatgaattcctctgccaaacagcctcgattgacttcttggctaaatac
cagtttgatttcaatctgtgcatccgggaaggaatatcttatttatccagagggcaagag
gatgaagcattaaggcgcttggatgttgtgtacaataatgagtcttttgatttagggttt
aactcaggagaagcaagagatacactggttgttagaattgcagatattttcttcaccgag
agattgaggaacagaataggtgaatggcgtgatgggttattacagaacaagaatggagag
tatagaattcaggagagcataaatgactccagccagcagttccagaccattttctttaac
atgcgtccagctattttgttgagtgggttcacctctcaccagctaaggttgattcagttg
gtgacagaaaaacattttcaagatcttgtttatctttgtgccaaagatgaagcttcctct
gtacagcaattgattgtttacatagattccaaaactgacaggagcttacttatgaaggag
gtcaaggaggggcttcgtaggcaggcagagatgaaaatcaaagctgcagttgggttccgg
catgtcattgacctcctttcctcagagcagaagttgattgttggtcacaattgctttctt
gatattgcgcacatacatagaaaatttttagggcctcttccttcgactgctgaagaatat
acctcctctattcacaagtacttcccatacatcattgatacaaaaattctcttgaataca
agtggtgtaattcggcctatgaggaagggcagcacatcactatcccgagcattcacacaa
ttgtatcctgaaattgcttccagtgtcaaaagatctcatttggatctgaaaccacgtgtt
agagtggaagttcaagtggatgacatgaggtcctcgaactggaactctggagctaagcat
gaagctggctatgatgcttttatgacaggatgtgttttcatccagacttgcagtcatctt
ggtttagatttcaatctccattcacccttcacaaactcagccaatgctgacaagcttcaa
aagcacatgaatcttctttatttaagttggacaaatggcgacatcattgatctgagtact
ggtaatcggactgcagagtctttgtaccacagcctacattcccatccaaagattatcttt
tcaaatattgctttgatatggggattcctgcccaaactaaaggcgagggagattaaggaa
tgcatctctaaagtcttcggtccaaactcagtaacctcggtctatcacttggatgtaact
gcagtgtttgttcagttcagcaaggcagaattagtctctgacttcctgcagttgaaggaa
accttggaaagaagcaatgatccaatctcagttctgcatccgctctcaaaacttcttgaa
ggtggaaatacttgtgctgccacttacaagttctataaaaaggtttgcagctctccggtt
tctgaattcatgtttgcggatcaggcggaggctatgggtatcaagtggaagaatgaattg
acaggattgaacgcacaggtgggaaccccccaagaaaatgatatggccgcttctccaagt
actgcaaacgaaagccagtcagggaaactaaacaatctgattaatgatctatcccgtggc
catttccgggatgatgaaaacattcattcttggtaccctgcagaagctcaggcaagtaaa
tag
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