Diospyros lotus (date-plum): 127792493
Help
Entry
127792493 CDS
T10632
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127792493
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127792493
Translation factors [BR:
dlt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127792493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127792493
NCBI-ProteinID:
XP_052178949
LinkDB
All DBs
Position
15:complement(1930186..1964322)
Genome browser
AA seq
1211 aa
AA seq
DB search
MASSSSDKERKRKKREKKAQTKAERKACRQLQNPKVNEAIKIRISDILQQFRASQDDAYT
FEANLTNEERAVVHVLCRKMGMTSKSSGRGNQRQVSIYKSKKKVDTMIGKENLTPFTFSE
EAQKVLQDLFTQYPPEDRDLVDSIVAVHSGQTERLQEKRDDFFLKPLMNKDDIVKKLDWL
ASSVEKTPNLKQITQGRAQLPIASFRDVITSTIESNQVVLISGETGCGKTTQVPQFLLDY
MWGKGEACKIVCTQPRRISAVSVAERISCERGENVGDSVGYKIRMESKGGRHSSIMFCTN
GILLRVLVSGGTGGLKSGDSRKLARDNVSDLTHIIVDEIHERDRYSDFMLAIMRDMLPSY
PQLRLVLMSATLDAERFSQYFGCCPVIRVPGFTYPVKTFYLEDVLKILRGENHLGSSLKD
SALEDSELTEEYRIALDEAIDLAWSNDEFDTLLDLVSSEEISKVLNYQHSTSGVTPLMVV
AGKGRVGDACMLLSFGADCHLQASDGTTALQWAERENQEEAAEVIKKHMEKALSNTKEEE
ALLDKYLSVSNPELVDVVLIEQLLRKICIDTEDGAILIFLPGWDDINRTRERILTSLYFK
DSSKFLIISLHSMIPSVEQKKVFKRPPPGCRKIILSTNIAETAVTIDDVVYVIDSGRMKE
KSYDPYSNVSTLQSSWTSKASAKQREGRAGRCQPGICYHLYSKFRAVSLPEFQVPEIRRI
PIEEICLQVKLLDPNCEVEDFLSKTLDPPVSETIRNAVFVLQEIGALSLDGKLTEVGKKL
GCLPVHPLIGKMLFLAVLLNCLDPALTLACASEYRDPFTLPMLPDEKKRAAAAKSQLASF
FGGNSDQLAVVAAFECWKNAKASGLEGRFCSQYFVSSGTMSMLSRMRRQLQTELVRHGFI
PNDVSSFSSNAHDPGILHAVLVCGLYPMVGRLCPPHKGGQRYIVETPSGDKVRLHPHSIN
FKLSSKKSKDRPLIVYDEITRGDGGLYIRNCSIVGPLPLLMQAKEIAVVPVEDADDKSDY
NDSDEDESNEDITEWHEKSDAKYAEKIMSSPDNAVKVVVDRWLSYELTALDVAQIYCLRE
RLSAAVLFKVTFPGEVLPQFLSASVNAIACALSFDGLRGISAPLEPVDSSTPMVTEAGGR
NHFLRSLLSGGVHQKHPPYHQNRTVTWNGQTRHDHSPSGSRYKVPQRRPEFGPAVWAPKG
NSSKQQRGNQS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcatcgtctgacaaggagaggaagaggaaaaagagggaaaagaaggcgcaa
acgaaagcggagaggaaggcgtgccgccaactgcaaaaccctaaagttaatgaagccatt
aagattcggatttccgatatccttcaacagttccgcgcatcgcaagatgacgcatatact
tttgaagccaaccttacaaatgaggagcgtgctgtagtacatgtattgtgtaggaaaatg
ggcatgacctcaaaaagttctgggcgtgggaatcagcggcaagtttctatttacaaatct
aagaagaaagtggacaccatgatagggaaggagaaccttactcctttcacattttcagaa
gaggctcaaaaggttttacaggacttatttacccagtatcccccagaagatcgagatttg
gttgattcgatagttgcagtacacagtggacaaactgaaagattacaagaaaaaagggat
gatttttttctgaagccattaatgaacaaggatgacattgtgaaaaagttggattggctt
gcttccagtgtagaaaagaccccaaacttgaaacagattactcaaggaagggctcagctt
cctattgcatctttcagggatgtgattacatcaacaatagaatctaatcaggtagtactt
atatctggtgagactggatgcggaaaaaccacacaggttccacagtttctcctagattat
atgtggggcaaaggcgaggcatgtaaaatagtctgcactcaaccacggcgaatttcagca
gtatcagttgctgagagaatctcttgtgaaagaggtgaaaatgttggagatagtgtggga
tacaagatacgcatggagagcaaaggtgggaggcactcatctattatgttttgcactaat
gggattctattaagggtgctggtttctggaggcactggagggctgaagtctggagattca
agaaaactggccagggataatgtctctgacttaacccacattattgtggatgaaattcat
gagagggatcgctactctgatttcatgctagcaattatgagagacatgcttccttcatac
cctcagctacgtttggtactaatgagtgctacccttgatgctgaacggttttcacaatat
tttggttgctgcccagttatcagagtccctggcttcacttatcctgtcaagactttctac
ttggaggatgtactaaaaattctgagaggagaaaatcaccttggttcttctcttaaagac
tctgcattagaggattctgagttaacagaagaatacagaattgcccttgatgaagccatt
gatctagcttggtcaaacgatgaatttgacacccttctggatttggtttcttcagaagaa
atctcaaaagttttaaattaccagcattcgacaagtggagtaacaccactaatggtggta
gctggaaagggtagagtaggtgatgcctgtatgcttctttcttttggtgctgattgccac
ttacaagccagtgatggaacgacagccctacaatgggctgaacgggagaatcaggaagaa
gctgctgaagttattaaaaaacacatggaaaaagctctttccaacaccaaggaagaagaa
gcattacttgataaatatctatctgttagcaatccagaacttgttgatgttgttctgata
gagcaattattgaggaagatttgtattgacacggaggatggagctatccttattttcctt
cctggatgggatgatataaatagaacgagggagagaatacttactagcttgtattttaag
gactcttctaagtttttaataatatctcttcattcgatgatcccgtctgtagagcaaaag
aaggtcttcaagcggcctcctcctggttgccgtaaaattattctttcaactaacattgct
gagactgctgttaccattgatgatgtagtttacgttatagacagtgggcggatgaaagag
aaaagttatgacccctacagtaatgtatcaactcttcagtcttcttggacttcaaaagca
agtgcaaagcagcgagagggacgtgcaggacgttgccagcctggaatatgctatcacctt
tattcaaaatttcgagctgtttcattgcccgaatttcaagtacctgagatcaggaggatt
cccattgaggaaatctgcttgcaggtgaagctacttgatccaaattgtgaagtggaagat
ttcctgagcaaaacactggaccctcctgtgtctgaaactatacgtaatgcagtttttgtt
cttcaagaaattggtgccttatcgctggatggcaaactaactgaggtcggaaagaagctc
ggttgtctaccagtccatccattaatcggcaagatgcttttcttagccgtattattgaac
tgccttgacccggccttaacattggcttgtgcatctgaatatagagatccatttactctt
cccatgttaccagatgaaaaaaagagagccgcagcagctaaatctcagctggcttcattt
ttcggtgggaatagtgaccagttagctgtagtagcagcatttgagtgctggaagaatgcc
aaggcaagtggcctagaaggacgattttgttctcaatactttgtatcctcaggcaccatg
agtatgctgtctcgaatgcgtaggcaacttcagactgaactggtgcggcatggttttatt
ccaaatgatgtatcaagttttagctcaaatgcacacgatccaggtatacttcacgctgtc
cttgtttgtgggttgtatcctatggtgggaagattgtgtccacctcacaaaggcgggcaa
agatatattgtagaaactccttctggtgataaagttcggttgcatcctcattccatcaac
tttaaattatcaagtaagaaatccaaagatcggcctttgattgtctatgatgaaataacc
cgtggagatggaggtctgtacataaggaattgtagcatcgttgggccactcccattatta
atgcaggcaaaagagattgccgtggttcctgttgaggatgcagatgataaaagtgactac
aacgattctgatgaagatgaaagcaatgaggatataaccgagtggcatgagaaatcagat
gcaaaatatgctgagaagattatgtcttctcctgataatgcagttaaggttgttgttgac
aggtggctctcctatgagttaacggcccttgatgttgctcagatctactgccttagagag
aggctgtctgcagcagtactctttaaagtaacatttcccggcgaagttcttccccaattt
ctgagtgcttctgttaatgcaatagcctgtgccctatcttttgatgggctgcgagggatc
tcagcaccattggaacctgtggattcatcaacaccaatggttactgaagctggagggagg
aaccattttcttagatcgcttttgtccggtggcgtgcaccagaagcatcctccgtatcat
cagaacagaacagtgacttggaatggacagactagacacgaccattctccttctggttca
aggtacaaagttccacaacggaggcctgaatttggtccggctgtgtgggcaccaaagggc
aattcttctaagcagcagcgtggtaatcaatcttga
DBGET
integrated database retrieval system
