Diospyros lotus (date-plum): 127793988
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Entry
127793988 CDS
T10632
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127793988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127793988
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127793988
Membrane trafficking [BR:
dlt04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127793988
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127793988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT80_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
127793988
NCBI-ProteinID:
XP_052180793
LinkDB
All DBs
Position
2:14164910..14179926
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AA seq
369 aa
AA seq
DB search
MANQFSSYPILCASFNQDNSCVAIGTRHGFRIFDSSTGRLLYERAIGAFIIVEMLYSSNL
LAIVGAGEQPALSPRRLCLFNTTTRNALQELTFLTSVLVVRLNRKRLIVVLQEKTFIYDV
NNLNILDTIDTVPNLKGLSAFSPCLDGCFLALPASTTKGSMLVYNVMELQSHCEIDAHQS
PLAAMVLSSNGVYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIYSLSFGPSKELPN
ILVATSSSGSIHAFSLGFAINQRRRRSSSFLGSIIPESVTDVLDPADHHVLHNAVPAGVK
SCAVVRCINKVADSSVSESVAFRASISIITYSGCFLEYRLSINHQNESSWILEREFNLLA
AISGHAINS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccagttctcgtcgtacccaatcctctgtgcttccttcaatcaggataatagt
tgcgttgctattgggacgaggcatggattcagaatatttgattccagtacggggaggctc
ttatacgaacgagctattggagcttttatcattgtggaaatgctttattcctcaaatctt
cttgctattgttggagctggtgaacagccagctttgtctccaagacgcctatgtttattc
aatacaactactagaaatgctcttcaagagctaactttcttaacctcagtccttgttgtt
cgtctaaacaggaaaagattgattgttgttttgcaagaaaaaacattcatatatgatgtg
aacaacctcaacatcttggatacaatcgacactgtgccaaatttgaaaggactctctgca
ttttccccatgtttagatggctgctttttggctcttccagcaagtacaacaaaaggatct
atgttagtctacaatgtcatggaactccaatctcactgtgagatagatgctcatcagtca
ccactggctgcaatggtactttcttcaaatggggtgtatattgcaacagcatctgaacag
ggaaccataatccgagttcacctcgtctcagaagcaactaagtcatacagcttccgtagg
gggacctacccgtcaactatatattcattatcgttcggtccatcaaaggaacttccaaac
attcttgtagcgacaagttcttcgggttctattcatgctttttccctaggatttgctata
aatcaaagaagaagaagatcaagtagtttcctcggatcgataataccagaatctgtgact
gatgtgctggatcctgctgatcaccatgtactccataatgctgttccagcaggagtcaaa
agctgtgctgtggttcgctgcatcaataaggttgctgactcatctgtgtccgagtctgtg
gcatttagggccagcatatccatcatcacctacagtgggtgcttcctggagtataggttg
agcatcaaccatcagaacgagtcctcgtggattttggaacgtgaattcaatcttttagca
gcaataagtgggcacgccatcaattcatga
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integrated database retrieval system
