Diospyros lotus (date-plum): 127794446
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Entry
127794446 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127794446 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127794446
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127794446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
127794446
NCBI-ProteinID:
XP_052181481
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All DBs
Position
2:complement(666426..697955)
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AA seq
1190 aa
AA seq
DB search
MDPEEVTAAAEEEPGPSAVVQDSLFPVVPQPASNAGASGSKSVAPPPQQWFCNRSFTADV
SAINDAVSSQHDHYFPLDLSGSENEGERKDKTEYDKDSNRPPSYELVESSSDGDSYRKRD
REQEKKKKKKKRRNISSSSSHREAAAGKACYDASNPSSRKPNVSSWATSDNSKTDAKGYY
FDSHGDRDNLAFGSLYRMDVARYKLYNSMKSGLNSEAWKKQRSLVFDGDSDIDALDGKLK
ASGRYWSAKHSALERHKNFKRIRIIAPKKSLASLPGDFIPLLDDQHSGEQFDGGSLSRAS
VIEESWEDEVLRKTKEFNKMSREHPHNEKVWLAFAEFQDKVASMQPQKGARLQTIEKKIS
ILEKAAELNPDNEELLLCLLNAYQSRDSTDVLVGRWQKILVQHSGSCNLWKSFLHVAQGE
FSRFKVSEMRKIYANATQALSSACSRKYRQVHQTANAPSSDPALLQQELGLVDIFISLCR
FEWQAGYQELATALFQAEIEYSLFCPSLLLTEQSKRRLFEHFWNSNGARVGEDGALGWST
WLEKEEEQRQKVISEESSNENEEGGWTGWSLPLSKSKDVSENPANNEHDDVPLEEFDEEL
QTRTNEQNDDTEALLRLLGIDADADPNIEVNDTITWSRWAEEELSRDSDQWMPVHAKSDR
VSHGDRTPDRDGDEQLSRVILFEDVDEYLFSISSEEARLSLVFQFMEFYGGRISKWICTN
SSSWEEMTLSLVALPDDVLDQLRKVHDVIVKSEFSSNFGFEFLGSSNNISMRVNMMKFLR
NATLLCLTAFPHNYILEEAALVAEELLNTKMNSFSCSVTPCRALAKSLIKSNRQDILLCG
VYAQREAAFGNIDNARKVFDMALASSEGLPSEFRSNASLLYLWYAEAEVCNDSHNGSESS
FRAVHILCCFGSGLKYSPFKSQPSSLQQLRARQGFKEQIRMLRSSWARGVIDDNSIALIC
SAALFEELTSGCDAGIEMLNKVFTMVLPERRSQSYQLESLFNYYVRMLWRHNSELGLSRV
LESIIQGLQAYPSNPELYAALVETSHRHTSPNKLRLIFDNFCQKNPSLIVWMFALSFEMR
KGGSQHRIHGLFERALGNEKLRNSVLLWRCYIAYEMDVACDASAARRIFFRAIHACPWSK
KLWLDGFVKLQGVLTTKELSDLQEVMRDKELNLRTDIYEILLQEQDEMQL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggacccagaagaagtcacagcagctgccgaggaagaacccggccccagcgccgtcgtc
caagattcactgttcccggtggttccccaaccggcatccaacgccggcgccagtggcagc
aagtcggtcgctcctcctcctcaacaatggttctgcaaccgcagcttcaccgccgacgtg
tccgccatcaacgatgccgtctcttcgcaacacgaccactacttccctctcgacctttca
ggatcagaaaacgagggagaacgaaaagataaaacggagtatgataaagatagtaatagg
cctccatcatacgaattggtggagtcgtcctccgatggagattcctatcggaaaagggat
agagagcaagagaagaagaagaagaaaaagaagagaagaaatatatcttcttcttcttct
caccgtgaagctgctgccggtaaagcctgttatgacgcctccaatccctcctcgaggaag
ccaaacgtttcttcttgggcaacgtctgataactccaagaccgacgccaaaggctattac
tttgattcccacggcgatcgcgacaatctcgcctttggctccctttacagaatggatgtt
gctcggtacaagctttacaactctatgaagtctgggctcaattccgaagcgtggaagaaa
cagaggagtttggtttttgatggagacagcgatattgatgcactggatggtaaacttaaa
gccagtggtcgctactggtctgcaaagcactctgcacttgagcgccataagaatttcaag
agaattcgaattattgcacctaaaaaatcattagcaagtcttcctggtgatttcattcct
ttattggacgatcaacattctggtgagcaatttgatggtgggtctctttcaagagcttca
gttattgaagaatcttgggaagatgaagtgttacgtaaaacaaaggaattcaacaagatg
tcgagggaacacccgcacaatgagaaagtttggttagcatttgcagagtttcaggacaag
gtggcaagcatgcagccacagaagggtgctcggttgcagactattgaaaagaagatcagt
atattggagaaggcggctgagctgaatccagataatgaagaactgttgctctgccttttg
aatgcttatcaaagcagagacagtactgatgtccttgttggtagatggcagaagatactt
gtgcagcattctggcagttgcaacctttggaaatcattcctgcatgtagcccaaggagaa
ttctctaggtttaaagtttctgaaatgagaaaaatatatgccaatgcaacccaagcttta
tcttctgcatgcagcaggaagtataggcaggttcaccaaactgctaatgcaccttcttca
gatcctgctcttctccaacaagaacttggtctggttgatatatttatcagcctttgcagg
tttgaatggcaggctggctaccaagagttggctactgctttgtttcaggcagagatagaa
tatagtttattttgtccttctttactgcttaccgagcagagtaaacgtagactgtttgag
cacttctggaacagtaatggtgcaagagttggagaagatggcgctcttggttggtcaaca
tggctggaaaaagaagaggaacaaaggcaaaaggttatcagtgaggagtcctcaaatgaa
aatgaagaagggggctggactggttggtcactaccattatctaaaagtaaagatgtcagt
gaaaatccagcaaataatgagcatgatgatgttccacttgaggagtttgatgaggaactt
caaacaaggaccaatgagcagaatgatgatacggaggccttgctaagactgctgggtatt
gatgctgatgctgatcctaatattgaggtcaacgacactataacatggtctagatgggca
gaagaagagttatcaagggattctgatcagtggatgcctgtccatgcaaaatctgatcgg
gtctctcatggggatcgcacaccagatagagatggtgatgagcaactttcgagggtcata
ttgttcgaagatgttgatgagtacctattctctataagctcagaggaagctcgtttatct
ctagtattccagttcatggagttttatggtgggaggatatctaagtggatttgcacaaac
agttcaagttgggaagaaatgactttaagcttggtggcattgccagatgatgtattagat
caattgagaaaggtccatgatgtaatagtgaaatcagagttttcaagcaattttggcttc
gaatttttgggcagctcaaataacatctctatgagggtgaacatgatgaaatttctccgt
aatgctaccttgctttgtttaactgcatttccacataactacattttggaagaagctgct
cttgttgctgaagagctattgaataccaaaatgaactcttttagctgttcagtcacccca
tgtcgcgctttagcaaagagccttataaagagtaatcgtcaggacatactgttatgtgga
gtttatgcacaaagagaggctgcttttgggaatattgataatgcaagaaaggtttttgac
atggcattggcatcatcggaaggacttccatcagagttccgctcaaacgcatctctttta
tatttgtggtatgctgaagcggaagtttgtaatgattcacataatggctcagagtcatca
ttccgtgcagtgcacattctatgttgctttgggagtgggttaaagtacagtccatttaaa
agtcaaccatcaagtctgcaacagctgagagcacgccaggggtttaaagaacaaataagg
atgctgagatcttcatgggcacgtggtgtgatagatgataattctattgctctcatttgt
tcagctgctttatttgaagaattgacctctggttgtgatgctggtatagaaatgcttaat
aaggttttcaccatggtgcttcctgaaagaagaagccaaagctatcaactcgagtctttg
ttcaactattatgtgagaatgctttggagacacaattcagaattaggactgtcaagagta
ctggagtccattatacaagggttgcaagcatatccttccaatccggaactttatgctgct
ttagtagaaaccagccaccgtcatacatcacccaataagctgcggttgatatttgataac
ttctgtcaaaagaatccatcgttaatcgtctggatgtttgctttgtcgtttgagatgagg
aagggcggttcccaacatcgaatacatggcctgtttgaaagggcactgggaaatgagaag
ttgcggaattcagtactgctgtggcgttgctatattgcatatgagatggatgttgcatgc
gatgcttctgcagctagacgaatttttttccgagctatccatgcatgcccatggtcgaag
aagctgtggctagatggttttgtcaaattgcagggggtactaactacgaaagagctgtca
gatcttcaggaagtaatgcgtgataaagaactaaacctgagaacagatatttatgagatt
ttacttcaagaacaagatgagatgcagttgtag
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