Diospyros lotus (date-plum): 127794475
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Entry
127794475 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127794475
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127794475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127794475
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127794475
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127794475
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127794475
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127794475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
127794475
NCBI-ProteinID:
XP_052181540
LinkDB
All DBs
Position
2:831862..838832
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AA seq
193 aa
AA seq
DB search
MKLRYAMVCSSNQNRSMEAHSLLKKEGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
MFDDLRRKDSDLYNRNGILPMLKRNSAVKHAPQRWQDNAADGCFDIVFTFEERVFDMVIE
DLHNRDHVLLKPVLVINLEVKDNHEEAAIGARLALSLCQELDKTEVWEDSIDEIVINFER
QNRRKLLYSISFY
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgatacgcgatggtctgttcgtcgaatcagaatcggagcatggaggctcac
tcccttctcaagaaagagggtttcgatgtatcttcctacggaaccggagcgcacgttaag
ctccctggtccttctctcagagagcccaatgtctacgatttcggcacgccctataagcac
atgttcgacgatctcaggcgcaaagattccgatctttacaaccgcaacggtatattgcca
atgcttaagaggaactcagctgtgaaacatgcaccccagcgctggcaagacaatgctgct
gatggttgttttgatatagttttcacatttgaagaaagggtctttgacatggttattgaa
gatcttcataatagggatcatgttcttttgaaacctgtgctagtgatcaacttggaagta
aaagataaccacgaggaagctgccataggagctcgacttgctctttccttgtgccaagag
cttgacaaaactgaagtttgggaggattctattgatgagattgtgattaactttgaacgg
cagaaccggaggaagctcttgtatagtatttccttctattga
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