KEGG   Diospyros lotus (date-plum): 127795029
Entry
127795029         CDS       T10632                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127795029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dlt03400]
    127795029
DNA repair and recombination proteins [BR:dlt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127795029
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA
Other DBs
NCBI-GeneID: 127795029
NCBI-ProteinID: XP_052182393
LinkDB
Position
2:25328456..25348324
AA seq 663 aa
MAASSLPNGFLVPLSNNLDEEASIPKLPISQSPKSVGRNSVPVSDKRLSRKHISISASRD
GSADIIVEGTNPIVVRSQGQRKKVLSGEKVKIIHGDIIELIPGHHFFKYASTAAENNSSS
VRKKRAPNESSELVEGERENVKRKRQVSEDEALVRNLQSELYNDSLVEDSTFEAIRQFNV
PKEKLPLTFQLLRVQGLPAWANTSSVSIADVIKGNVLVAVLSNYMVDMDWLFSACPVLKK
VPHVLVIHGESDATVEHMKRIKPKNWILHKPPLPISYGTHHSKAMILVYPRGVRIIVHTA
NLIYVDWNNKSQGLWMQDFPWKDQNSSNKGSEFETDLIDYLSTLKWPEFNVNLPALGNLN
VNASFFKKFDYSCAMVRLIASVPGYHKGANLKKWGHMKLRTILQQCIFDKMFQKSPLVYQ
FSSLGSLDEKWMSELASSMSSGVSEDKKPLGLGEPLIVWPTVEDVRCSLEGYGAGSAIPS
PLKNVEKEFLKKYWAKWKASHTGRCCAMPHIKTFARYNGQNLAWLLLTSANLSKAAWGAL
QKNNSQLMIRSYELGVLFIPSPVKSGCGFSCTENGDSAELQDKCGKSLDYSETKRTKLVT
LAWQGNSNTDSSEVIRLPVPYELPPKPYSAKDVPWSWDRRYQKKDVFGQVWPRQVQLYTS
QDA
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggccgcgtcttctcttccgaatgggttcttggtgccactttccaacaacttagacgaa
gaagcgtcaattcccaaattaccgatttcccaaagccctaaatccgtcggccgcaattct
gttccggtctccgataagagactcagccgcaaacatatctctatatcggcctcccgcgat
ggttccgccgatattattgtggagggaacaaaccccattgttgttagatcccagggtcag
aggaagaaagttctgtctggagaaaaagtgaaaattatacatggtgatattattgagttg
atacctggacatcatttttttaagtatgcaagtacggctgctgagaacaactcatcttca
gtcagaaagaagagggctccaaatgaaagtagtgaacttgttgaaggtgagagggaaaat
gtgaaaaggaaacggcaagtgtctgaagatgaagctctagtgagaaatttgcagtctgag
ctgtacaatgatagcctagtggaggacagcacttttgaagccatccggcagtttaacgtt
cctaaggaaaagttacctttaacttttcaacttctacgtgtgcaaggacttcctgcatgg
gcaaatacctcttctgtttctattgcggacgtgatcaagggcaatgtgcttgtggctgtc
ctttcaaattacatggtggacatggattggttattttctgcatgtccggtgcttaaaaag
gtccctcatgttttggtaattcatggggagagtgatgccactgtggagcatatgaagaga
atcaagccgaaaaattggattttgcacaaacccccattaccaatttcatatgggacccat
cattcaaaagccatgattcttgtctatcctcgaggtgtgagaattattgtacatacagca
aacttgatttatgttgactggaacaacaaaagccaaggtctgtggatgcaagatttccct
tggaaggatcagaatagttcaaacaaaggatctgaatttgaaactgacctgattgattat
ctcagcacattgaagtggcctgaatttaatgttaatttaccagctcttggcaacctcaat
gtcaatgcatcctttttcaagaagtttgactacagctgtgcaatggttaggttgattgca
tctgtccctggatatcataaaggtgccaatttgaaaaagtggggacatatgaagttacgt
accattctccaacaatgcatctttgacaaaatgtttcaaaagtcccccctcgtttaccag
ttctcctctcttggttctttggacgagaagtggatgtccgagctagcatcatcaatgtca
tcaggtgtctcggaagacaaaaagcctctgggtttaggggagcccttaatagtatggcct
actgtagaagatgtgaggtgttcgttagagggctacggtgctgggagtgccatcccaagc
ccattaaaaaatgtggagaaagaattcttaaagaagtattgggcgaagtggaaggcaagc
catactggtcgatgttgcgcaatgcctcatataaagacatttgcccgttataatggtcaa
aacctagcgtggctcctgctaacttcagcaaacctaagcaaagctgcctggggagcactc
cagaaaaacaattcacagctgatgatccgttcttacgagcttggagttctctttatacct
tcccctgtcaaatctggttgtggattttcttgtacagagaacggggattcggcagagctt
caggacaaatgtggaaaatcattggactattctgaaacgaaacgaacaaagcttgtgact
ctggcttggcaaggaaacagtaacacagattcctctgaagtaatccgattgccagtgccc
tacgagcttcctccaaaaccatattctgccaaagatgtcccgtggtcctgggacaggcga
tatcagaagaaggatgtctttggtcaggtttggccaagacaagttcagctatacacttcc
caagatgcttaa

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