KEGG   Diospyros lotus (date-plum): 127795046
Entry
127795046         CDS       T10632                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
dlt  Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dlt03036]
    127795046
   03400 DNA repair and recombination proteins [BR:dlt03400]
    127795046
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127795046
DNA repair and recombination proteins [BR:dlt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127795046
SSDB
Motif
Pfam: MMS19_N MMS19_C FAM216B PH_24
Other DBs
NCBI-GeneID: 127795046
NCBI-ProteinID: XP_052182425
LinkDB
Position
2:complement(43448988..43543192)
AA seq 1164 aa
MADSNQWVKHIESFVGSSSSPSQQAASLDAIAALLKNDVITMEKFVREMGMYLTTTDSII
RARGMLLLGELLTLLVLKPLDDASLRSLIKFFAERLADWKGLRGAIVGCLALMHRKSNVG
MISVDEARAVAQSYLQNLQVQSLGQHDRKLCFELLECLLDRYPDAVVILGDDLVYGICEA
IDGEKDPQCLMITFHIVEVLVRLFPDPSGPLASFAGDLFEILGCYFPIHFTHPNGEDVDV
NRDELSTSLMLAFASTPLFEPFAIPLLLEKLSSSLPSAKVESLRYLSYCSMKYGSERMAK
HIAALWPLLKETIQYSLQPTSSVESETFDGVGFQENQIVSEAHKLLQKVVQQDDGLFSSL
IVGDEEINSTIKSISSFKKYVDIPMQNKHKLHAVGRILSVSAGASVASCNRVFESFFQTL
MDALGLSGSSGDSPQEGDYEFFENLNYGALFLCIELLDACKHLVVSSKELNSITVSPNER
WCCMLQGFCASLIKSFSCALMINTDKESQNAYIRSGVKGLQILATLPGNFLPVSKSIFEN
ILKQLMSVITLNFNKSFLWKLSLKALVEIGSFVDTCHESDKAQSFKGIVVEKIVFLISSD
DSTISLSHKLEAISEIGRTGLDSMLTIVKGLENTIFAKLSAHQVQGTVEIESTIELLECL
SNKLLPWFDKIGGLDEVPFHFVLNFWDHIEKSINFSIGCQEKGLLDPIMTAMKQAVAKCS
EKSQSIIIQRAFYVFMSTTSFPLKDSMSVTTPAKIEASGLNHGSSCFLPRDEWIISLLAS
VIIALRPETHIPNIELILQKFTAALLSGNVPAAQALGSIVNKLPLKVNTVETSGGCSLEE
ALDIIYGNSLWTSDGYSLSRICGGISDGSEIGLSGLRSSTQESWLFHVHVVVGLAWIGKG
LLMRGHEKVKGITMTIWSSLLSNGGSVAIPRPSTEQDMLPLMKSAADAFHVLMSDSEACL
NRSFHAIIRPLYKQRYFSTMMPIMLSSVAKSDSSIKRSMLHRAFVHILSDTPLSAVLTEA
KKLISVLVDSLSMLSKDILNKDILYNALLVLSGILMDKNGQEAVVENAHIIINHLIRLTF
YPHMMLVRETAIQCLVAMSTLPHARIYPLRTQVSCHIKWQSATGSLCYELYQILSMTQKE
QSGKRLSDVVKLGHQLHLKVFIFE
NT seq 3495 nt   +upstreamnt  +downstreamnt
atggccgactcgaatcaatgggttaagcacatcgaatcgttcgtcggctcttctagctct
ccttcccagcaggctgctagtttagatgcgattgccgctcttttgaagaatgatgtgata
actatggaaaaatttgttagagagatggggatgtatttgaccactacagacagcatcatt
cgggcaagaggtatgcttcttcttggagagctactgacgctccttgtattaaagccactt
gatgatgcttccctgcgtagcttgataaaattctttgcagaaaggctggcagattggaag
ggcttgcgtggtgccattgttggttgcttggcactaatgcataggaaaagtaatgttggt
atgattagtgttgatgaagcaagagcagttgcccagtcttatctacaaaacttacaagtt
caatccctgggacagcatgataggaagctttgctttgaacttctggagtgcctattagac
cgctatcctgatgcagttgtcatactgggtgatgaccttgtctatggaatctgtgaagct
attgatggagaaaaagatccccaatgcctaatgatcacatttcatatagtggaagttttg
gtgcgactattcccagatccatctggtccactagcaagttttgctggggatctttttgaa
attttgggctgttacttccccatccactttacacatcctaatggtgaagacgtcgatgtg
aatagggatgagctatcaacgtcacttatgctggcttttgcttctacacctctttttgaa
ccctttgccatcccgttgcttcttgaaaaactttcttcttctctgccatcagcaaaggtt
gagtctttgagatatcttagctattgtagcatgaagtatggatcagaaagaatggctaag
catattgctgctctttggcctttattaaaagagacaattcaatactcattacaacctact
tcatctgtggagtcggaaacgtttgatggtgttggttttcaggagaatcaaattgtgagt
gaagctcataaacttttgcagaaggttgttcagcaagatgatggtttgttctcaagtttg
attgttggtgacgaagaaataaactcaactatcaagtctatttctagttttaagaagtat
gttgatattccaatgcaaaacaaacataaactacatgcagttggtcgaattttatctgtt
tctgctggagcttctgttgcttcctgcaatagagtgtttgaaagtttcttccagacctta
atggatgccttgggactttcaggttcatctggggatagtcctcaagaaggagattatgaa
ttttttgaaaatcttaactatggagccttatttctatgcattgaactccttgatgcatgt
aaacatttggttgttagctctaaagaacttaattcaattactgtgtctccaaatgagaga
tggtgctgcatgcttcagggcttttgtgcctcattaatcaaatcattcagttgtgcctta
atgatcaacacagacaaagaatcccagaatgcatatatccgctctggagttaaaggtttg
cagattttggcaacattacccggaaacttcttacctgtatcgaagtccatatttgaaaat
attttgaagcagttgatgtcagtcatcactttgaattttaacaagtcatttctgtggaag
ttgtccttgaaggccttggtggaaattggatcatttgttgatacatgtcacgagtctgac
aaggcacagagttttaagggtattgttgttgaaaagattgttttcttgatctcttctgat
gattctactatatctttgtcacacaaacttgaagcaatatctgagattggcagaactggg
ttggactctatgctgacaattgtcaaagggttagagaatactatatttgccaaattatct
gctcatcaggtacagggaactgttgaaattgagtctaccatagagcttttggaatgtttg
tcaaacaagctgcttccatggtttgataaaattggaggtcttgatgaagtccctttccac
tttgtccttaatttctgggaccacattgaaaaaagcatcaatttcagcattggatgccag
gaaaaaggacttcttgatccaataatgacagcaatgaagcaagctgttgcaaaatgttca
gagaaaagtcaaagcatcattatccagcgagccttctatgtatttatgtcaactacttct
ttcccattaaaggactccatgtctgtaaccactccagccaaaattgaagcctcagggctt
aatcatggttcaagctgttttctgccaagagatgagtggataatctcattactggcttct
gttatcatagctcttcgtcctgaaacacacatcccaaatattgaattaatattgcagaag
ttcacggccgcccttcttagtggtaatgttcctgcagctcaggctttgggttccattgtt
aacaaactgcctttaaaagtcaacacagtagagacctctggtggttgtagtttagaagaa
gcactggacataatctatggcaatagcttgtggacttctgatggttacagtctctcgagg
atttgtggtggaataagtgatggcagtgagattggtcttagtggtttaagatcaagtacc
caagagagttggttgtttcatgtccatgtggttgttggactagcatggataggtaaaggt
ttgcttatgcgaggtcatgaaaaggtcaaaggcataacaatgaccatctggagttcttta
ctgtcaaatggcggtagtgtggccatacctcgtcccagtactgagcaggatatgcttccg
ttaatgaaatctgctgcagatgcatttcatgttcttatgagtgactctgaggcttgttta
aacagaagttttcatgcaatcattcgaccgctctataagcaacggtatttctctactatg
atgccaattatgctatcttcagtggctaaatccgattcgtcaattaaaaggtccatgctg
catcgagcctttgttcacatcctatctgatacgccacttagtgctgtcttgactgaagct
aagaagctcatctcagtattggtggatagcttatccatgttgagcaaggatattttgaat
aaagatatcctatataatgccctgctagtgttgtcaggaatattaatggacaaaaatgga
caagaagctgttgtagagaatgcacatattattattaaccaccttatcaggcttacattt
tacccccatatgatgcttgttcgagagacagcaattcagtgtcttgttgcaatgtctact
ctgccccatgcaaggatataccccctgagaactcaggttagctgtcatatcaaatggcaa
tcagctactggctctttgtgctacgagctatatcaaattctctcgatgacccaaaaagag
cagtccggcaagaggctgtcagatgtcgtcaagcttgggcatcaattgcaccttaaagtc
ttcatttttgagtag

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