Diospyros lotus (date-plum): 127795066
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Entry
127795066 CDS
T10632
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127795066
03083 Polycomb repressive complex
127795066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127795066
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127795066
Histone modification proteins
HAT complexes
HATB complex
127795066
HDAC complexes
Sin3A-HDAC complex
127795066
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127795066
PRC2.2
127795066
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127795066
Heterochromatin formation proteins
Other heterochromatin formation proteins
127795066
Chromatin remodeling factors
NuRD complex
127795066
NuRF complex
127795066
NuRF complex (fruit fly)
127795066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
127795066
NCBI-ProteinID:
XP_052182469
LinkDB
All DBs
Position
2:44692030..44729588
Genome browser
AA seq
467 aa
AA seq
DB search
MKEEGGRAAQPTVDERYTQWKSLVPILYDWLANHNLVWPSLSCRWGPLIETATYKNRQRL
YLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIR
ELPQSSKIVATHTDSPDVLIWDVEAQPNRHAVLGAQDSRPDLILTGHQDNAEFALAMCPI
EPFVLSGGKDKSVVLWSIQDHISSLAADPGPSKSQFGVSGVKSITKVGVGNDKPVESPTI
GPRGTYLGHGDTVEDVQFCPSSAEEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHC
VDWNPHDVNLILTGSADNSIHMFDRRKLTSGGVGSPVHIFEGHNAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKIGKRPDNALSRVSDHPPGLFFRHAGHRDKVVDFHWNSCDPWTIV
SVSDDGESTGGGGTLQIWRMIDMIYRPEDEVVAELDKFKSHILTCSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaagggggaagagcagcgcaaccgacggtcgacgagcgctacacacagtgg
aaatcgctggtccccattctctacgactggttggccaaccacaacctcgtttggccttct
ctctcttgccgatgggggccgctgatagagaccgcgacgtacaagaatcgccagcggctc
tacctttcagaacagactgatggcagtgttccaaacacactagttatagcaaactgtgaa
gttgtgaagcccagggttgctgctgcagagcacatatctcagttcaatgaagaggcacgc
tctccttttgtaaagaagttcaaaacaatcattcatcctggagaggtcaatcggatcaga
gagctcccacagagtagcaagatagtggcgacacacaccgacagtccagatgttctcatt
tgggatgttgaggctcaacctaatcgtcatgctgttttgggagctcaagattctcgtcca
gacttgatactgaccgggcatcaggacaatgcagaatttgctcttgcaatgtgcccaatt
gaacctttcgtgctctctggtgggaaggataagtcggtggttttgtggagcattcaggat
catatctctagcttggctgcagatccgggaccctcgaagtcccaatttggtgtttccggc
gtcaaaagcatcacaaaggttggtgtgggtaatgataaacctgtagagagccctactatt
ggacctcgaggtacttacctagggcatggggacactgttgaagatgttcagttttgccct
tcaagtgctgaagagttctgcagtgtcggtgatgattcttgccttatactatgggatgca
agaacgggctctagtccagtcgtcaaggttgagaaagctcacaatgctgacctgcactgt
gttgattggaatcctcatgatgttaatctcatactaacggggtcagctgataattccatt
cacatgtttgaccgtcgaaagctcacttctggaggagttggatcacctgttcatatattt
gagggtcacaatgctgccgtgctttgtgtacagtggtctcctgacaagtcatctgtattt
gggagttcagcagaggatggtatcttgaatatctgggatcacgaaaagattggtaaaaga
ccggataatgctttatctagagtttcagatcatccaccaggcttgttttttagacatgct
ggacacagggataaggttgttgatttccactggaactcatgtgacccttggacaattgtc
agtgtgtctgatgatggtgaaagtactggtggtggtggaacactgcagatatggcgtatg
attgacatgatctacaggccagaagatgaggtggtcgcagaacttgataagttcaaatcc
catattcttacttgttcatcctga
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