Diospyros lotus (date-plum): 127795079
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Entry
127795079 CDS
T10632
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127795079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127795079
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127795079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
127795079
NCBI-ProteinID:
XP_052182487
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Position
2:complement(8185472..8216964)
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AA seq
1109 aa
AA seq
DB search
MQRQKSILSFLQRRLPESQKSDGDMLEDRREPHFPGKQENRNAVAFGQPTASSAVDSSCG
IGGIETPPEKVPRQIFPVVNDDMERPFTFASIKHRFVKFDDREKSCDRKLENDGFVKIFP
TTNKLGNLRRLPNEDSASEHSRKGNIVSSNGTDYQKNKGCPVFVENDDDILGPETPGMRP
LVPRYKRIQEDSYKFEGSIGCSVLDSSKRVKLLKDSKAGERNHEVLSDMTSKFEWLDPSR
IRDANGRRPGDALYDKRTLFIPSDAVKKMSASQRQYWNVKSQYMDIVLFFKVGKFYELYE
LDAEIGHKELDWKMTFSGVGKCRQVGISESGVDDAVQKLIARGYKVGRMEQLETSEQAKA
RGGATSVIQRKLVQVLTPSITTDGNLGPDSVHLLAIKEGNCELNNGSTAYGFAFVDCAAL
KFWVGSISDDASCAALGALLMQVSPKEVIYESPGMSREAQKALKKYTLTGSAASQLTPVQ
PAVDFIDSSEVRNFIQSKRYFKGCSDTYNCFLDGIMHPALALCALGGLISHLSRLMSDDV
LRNGDLQPYQVYRGCLRIDGQTLVNLEIFNNNADGGPSGTLYGYLNNCITSSGKRLLKKW
ICHPLNDVDKINCRLNVVEELMAHSEVMLLVAQYLRKLPDLERLLGRVKASFQSYNLLVL
PLIGAKVLKQRVKAFGSLIKGLRVGMDLLILLQNERQIMLSFSKVLKLPALSGNDGLDKF
LTQFEAAVESDFPNYQDHNVKDSDDEILSILTELFIEKAHEWAELIQAIDCIDVLRSFAI
TVHSACGAMSKPVILPCSNSSSSISSQITRGPILKIKGLWHPYALGDNGELPVPNDVNLG
EDTDGYHPRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCEMCVLSLVDIIFTRLGA
TDRIMTGESTFFIECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKV
HCRLLFATHYHPLTKEFACHPHVTLQHMACTFKLNFETPSQGAKELVFLYRLASGACPES
YGMQVALMAGIPKQVVDAASRAGEAMKERIGETFKSSEQRSEFSSLHEEWLKALLTISGT
REQNVDCIDAFDTLFCLWHELRSSYQPGK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcagaagtctatattgtccttcctccaaagacgtttgccggaaagccagaaa
tcagacggagacatgcttgaagaccggcgcgaacctcattttccggggaagcaagagaat
cggaacgctgtggctttcggccaacctaccgcttcttcagcagtggactcctcttgcgga
atcggaggaatagaaaccccgccggagaaagtgccacgtcagatttttccggtggtgaat
gacgacatggagaggccttttactttcgctagcattaagcacaggttcgtgaagttcgat
gacagagagaaatcttgtgataggaagctagaaaatgatggttttgtcaaaattttccca
accactaataaattaggtaacctgcgaaggttgcctaatgaagattctgcctctgaacat
tcgaggaagggaaatattgtcagttccaatggaacagattaccaaaagaataagggctgt
ccagtgtttgtagaaaatgatgatgatattcttgggccagaaacaccaggtatgcggccg
cttgtaccacgttataagaggattcaagaggacagttacaagtttgagggtagcattggt
tgctctgtgcttgattctagcaaacgggtgaaactacttaaagattcaaaggctggagaa
agaaaccatgaagtgctatctgatatgactagtaagtttgaatggcttgatccatctcgg
atcagggatgctaatggaagaaggcctggtgatgccctatatgacaagaggacactattt
ataccttctgatgctgtgaaaaaaatgtcagcatctcaaaggcagtactggaatgtgaag
tctcaatatatggatattgtgcttttcttcaaagtgggaaaattttatgaactctatgaa
ctagatgctgaaattgggcataaggagcttgattggaaaatgacctttagtggtgtggga
aaatgtcgacaggttggcatctctgagagtggggttgatgatgcggttcaaaagttgatt
gctcgcgggtataaagtcgggcgaatggagcagttggaaacatctgagcaagcaaaagcc
agaggaggtgctacttctgtaatccaaagaaaattagttcaggtactaacaccatcaatc
acaactgatggcaaccttgggcctgattctgttcaccttctcgcaataaaagaggggaac
tgtgaacttaataatggttcaactgcatatggctttgcttttgttgactgtgctgcttta
aaattttgggttggttccattagtgatgatgcttcctgtgcagcattgggggcattgttg
atgcaagtgtcacctaaggaagtaatatatgaaagtccagggatgtccagagaagctcaa
aaggcactcaaaaagtacacactaactggatccgctgcttcacaactcactcctgtacag
ccagctgttgattttatagattcttctgaagttagaaattttattcagtcaaaaagatac
ttcaaagggtgtagtgatacgtacaattgttttcttgatggcattatgcacccggctctt
gcattatgtgcacttggtggactcattagtcatctatccaggttgatgtcagatgatgtt
ttacgtaatggagatcttcaaccataccaagtctataggggttgcctcagaattgatggg
cagacattggttaatcttgagatattcaataataatgctgatggtggtccatcaggtaca
ctctatggttatcttaataactgtataacgtcatctggaaagcgacttttaaagaaatgg
atctgtcatccactgaatgatgtagataaaatcaactgtaggcttaatgtggttgaggaa
ctcatggcacattccgaagttatgctgctagttgctcaatatcttcgcaagcttccagat
ttggaaagattgctaggacgagttaaagctagctttcagtcatataatttacttgtactg
cctttgattggagcaaaagttctaaaacagcgagtgaaagcatttggttctctcattaaa
ggcctacgtgttggaatggatctattgatacttctgcagaatgagaggcaaattatgtta
tcgttctctaaagttctaaaacttccagcactaagtggtaatgatgggcttgataaattc
cttactcaattcgaagcagctgtagaaagtgatttccccaactaccaggaccataatgtg
aaggactcggatgatgaaatactctcaattctgactgagttatttattgagaaagctcat
gaatgggctgaacttatccaagccatagattgcattgatgtcctaagatcttttgcaatc
actgtacattctgcatgtggggcaatgtccaaacctgtcattttaccttgctctaactct
tctagttctatttcttcccaaataactagaggacccattcttaaaatcaaagggctatgg
catccttatgcccttggcgataatggagagttgcctgttccaaatgatgtaaaccttgga
gaggacacagatggttatcacccccgaactttactgttgactggaccaaatatgggtggc
aaatctactcttctacgtgctacttgtctagctgttatactggcgcagctaggctcttat
gtgccctgtgagatgtgtgttctttcacttgtggatatcattttcacaaggctcggcgcc
actgaccgaatcatgacaggcgagagtaccttctttattgagtgcgcagaaactgcatca
gttcttcaaaatgctacacaagattctctggttcttcttgatgaattagggcgaggaaca
agcacttttgatggatatgccattgcttatgctgtatttcgtcatctaattgagaaggtc
cactgtcgattattgtttgctacacattatcacccactgacaaaggagttcgcttgtcac
cctcatgttacattgcaacacatggcctgcactttcaagttaaatttcgagaccccatct
caaggcgcgaaggagttggttttcctgtacaggttagcctctggagcatgcccggagagc
tatggaatgcaagtggcactaatggccgggatcccaaaacaggtggttgatgctgcatct
agggctggggaagcaatgaaagaacggattggagaaaccttcaagtccagtgaacagaga
tctgaattctcgtctctccacgaagagtggttgaaggccctcttgactatctcagggaca
cgagaacagaatgttgactgcatcgatgcattcgacacgttgttttgcttgtggcatgaa
ctgagaagctcgtatcaacctggcaaataa
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