Diospyros lotus (date-plum): 127795221
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Entry
127795221 CDS
T10632
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127795221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127795221
03110 Chaperones and folding catalysts [BR:
dlt03110
]
127795221
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127795221
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127795221
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127795221
Messenger RNA biogenesis [BR:
dlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127795221
Chaperones and folding catalysts [BR:
dlt03110
]
Heat shock proteins
HSP60 / Chaperonin
127795221
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127795221
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127795221
Exosomal proteins of other body fluids (saliva and urine)
127795221
Exosomal proteins of breast cancer cells
127795221
Exosomal proteins of colorectal cancer cells
127795221
Exosomal proteins of bladder cancer cells
127795221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
127795221
NCBI-ProteinID:
XP_052182719
LinkDB
All DBs
Position
2:44829392..44842935
Genome browser
AA seq
574 aa
AA seq
DB search
MYRVGAALSSSLRSSASRELVRSRVVHGRNYVAKDISFGTGARAAMLQGVNELAEAVKVT
MGPKGRNVIIEKSHGAHKVTKDGVTVAKSINFAEKAKNVGADLVKQVANATNSAAGDGTT
CATVLTQAIFMEGCKSVAAGVNVMDLRSGISMAVDAVMDELKSRAIKISTPEEITQVATI
SANGEREIGEMIARAMEKVGNEGVITVSDGNTLDDELDAVEGMKLGRGYISPYFVTDQKT
QKCELEYPLILIHDKKISDVNSLVQILELAVKKNRPLLIVAEDVEGDALAMLIINKHRAG
IKVCAIKAPGFGENRRANLNDIAILTGGEIISEESGLNLDKVKIEMLGTAKKVTVSLDDT
IILHGGGDKKLIEERCEQLRTTIKKSTAIFDKEKAQERLSKLSGGVAVFKVGGASEVEVG
ERKDRVTDALNATRAAVEEGIVPGGGIALLYATKALGNIQTANEDQKRGVQIIENALKAP
TFTIVSNAGDDGALVVGKLLEQDDLNLGYDAAKGRYVNMVAAGIMDPLKVVRTALVDAAS
VSMLLTTTEATVVDLQGEKNPLANRMPNLDDMGY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgagtcggtgcagccttgtcctcgtctttgaggtcctctgcttccagagaactg
gtgcgcagtagagttgtacatggcagaaattatgttgccaaggatatcagttttggcact
ggggctcgagccgctatgctgcagggcgttaacgagctcgcagaggccgttaaggtcacc
atgggaccaaagggtcgtaatgtaattattgagaaaagccacggagcacataaagtcaca
aaggatggtgtcactgttgccaaaagcataaattttgctgaaaaggctaaaaatgttggt
gcagatcttgtgaagcaggttgctaatgcaacaaattctgctgcaggcgacggtaccacc
tgtgccacggtccttacacaggcaatattcatggaaggttgcaagtctgtagctgctggt
gtaaatgtgatggatttgcgtagtggtattagtatggcagttgatgctgttatggatgag
ttgaagagcagagctataaagataagcacaccagaagagataacacaggtggcaactata
tctgcaaatggtgagcgtgaaattggggaaatgatagcacgtgcaatggagaaagttgga
aacgaaggagtgattactgtttctgatggaaatactttggatgacgaattggatgcggtg
gaaggaatgaagctgggcaggggatacatatctccttactttgttactgatcagaagaca
caaaaatgtgaactggaatatccactcattcttattcatgacaagaaaatttcagatgtg
aactcacttgttcaaatattagagcttgctgtaaagaaaaatcggcccttgcttattgtt
gctgaggatgtggagggtgatgcactggctatgctcattataaacaagcatcgtgctgga
attaaggtttgtgccattaaagcgccaggatttggggaaaacagacgagctaatttaaat
gacattgctattcttactggaggagagattatcagtgaagaaagcggcttaaatcttgac
aaggttaaaattgaaatgcttggtactgcaaaaaaggtcacagtttctcttgatgacact
ataattcttcatggaggtggggataagaagctgattgaagaaagatgtgaacagctaagg
accaccattaagaagagcactgctatttttgacaaggagaaagcacaggagcgattgtca
aaactatctggtggtgttgctgtattcaaggttggaggagctagcgaggtagaggttgga
gaaaggaaagatagggttacagatgctttaaatgccacaagggcagcagttgaagaggga
attgttccaggtggtggcattgctctcttgtatgccaccaaagctctggggaatatccaa
acggcaaatgaagaccagaagagaggggttcaaattattgagaatgctctaaaggcacct
actttcactattgtttcaaatgctggcgatgatggtgctttggttgttggcaagcttttg
gagcaagatgaccttaatttgggttatgatgctgctaagggtcgttatgttaacatggta
gcagctggaattatggatccgttgaaagtagttagaacagccttggtagatgctgccagt
gtgtcaatgttattgacaacaacggaggctactgtcgtggaccttcaaggagagaagaac
ccacttgcaaaccgcatgcctaacttggatgacatgggttactga
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