Diospyros lotus (date-plum): 127795461
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Entry
127795461 CDS
T10632
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127795461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127795461
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127795461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
127795461
NCBI-ProteinID:
XP_052183102
LinkDB
All DBs
Position
1:35685261..35692548
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AA seq
305 aa
AA seq
DB search
MSRSSRTLYVGNLPGDVREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGHSSSIDRYSSHSGGRGSRGGVSRRSEYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFTRS
IVRVREYKSSRSRSRSYSRSRSRSRSNSRGRSYSRSVSRSRSKSPKAKTSRRSPARSRSR
SASRSRSGSKPRSLSRSPSRSRSPVPSRQKRKSKSPKKQSPSRSRSPPSPAKSRSRSRSK
SVSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcaagcagaacgctatatgttggcaatcttcctggtgacgttcgtgaacgg
gaagttgaagatctcttctacaaatatggaccaatagctcatatagatttgaaaatcccg
ccaagacctcctggctatgcatttgttgagtttgaagaggctcgtgatgctgaagatgcc
attcgaggacgtgatggctatgattttgatgggcaccgcctgcgggtagagcttgcacat
ggtgggcgtgggcattcatcatcaatagatcggtacagtagccatagtggtggtcgaggt
agtcgaggaggagtgtcaaggcgttctgagtatcgtgtgttggtcactggactacctagt
tctgcatcatggcaggaccttaaggatcacatgcgtcgagctggggatgtctgtttctcc
caggttttccgtgatggaagtggtactactggaattgtcgactacacaaactatgatgac
atgaaatatgcaattaggaaacttgatgactctgaatttcggaatgccttcactcgttca
attgttcgggtaagagaatataagtcaagccggagtcggagcaggagctattctaggagc
cgtagccgcagtcgttctaactcaagaggcaggagctacagtcgcagcgtgtctcgaagc
aggagtaagtccccaaaagccaagacttcacgccgctcacctgctcgatcccgttcaaga
tctgcttctcgttcgcgttcaggatcaaagccacgttctttgtcaagatctccttcaaga
tccagatctcctgtaccatctcgtcagaagcgcaagagtaaaagcccaaaaaagcagagt
cctagccggagccgtagccctccgagtccagccaagagcaggagcaggagcaggagtaag
agtgtatccagcaggtga
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