Diospyros lotus (date-plum): 127795538
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Entry
127795538 CDS
T10632
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127795538
03083 Polycomb repressive complex
127795538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127795538
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127795538
Histone modification proteins
HAT complexes
HATB complex
127795538
HDAC complexes
Sin3A-HDAC complex
127795538
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127795538
PRC2.2
127795538
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127795538
Heterochromatin formation proteins
Other heterochromatin formation proteins
127795538
Chromatin remodeling factors
NuRD complex
127795538
NuRF complex
127795538
NuRF complex (fruit fly)
127795538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
127795538
NCBI-ProteinID:
XP_052183253
LinkDB
All DBs
Position
2:complement(9504063..9529287)
Genome browser
AA seq
512 aa
AA seq
DB search
MEQPRRRGRPRKDKTAVTVPKQDREPKHEEEEDEEEEEGSESDERKQMRDKKPAHQSFSV
DEKYAKWKSIIPVLYDWLANHNLVWPSLSCRWGLQLEQGKFKNRQRLYLSEQTDGSVPNT
LVIANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHT
DSPEVLIWDIEAQPNRHAVCGAADSRPDLVLTGHQENAEFALSMCPMEPLVLSGGKDRSV
VLWSIHDHVSTLTTDASTKPAGSSGSIIKASENPSIGPRGIFQGHSDTVEDVQFCPSSAQ
EFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWSPHDENLIITGSADHSVRMFD
RRNPISGGVGSPIYKFEGHEAAVLCVQWSPDRSTVFGSSAEDGLLNIWDYEKVGAKREIG
EKTPFSPPGLFFQHAGHRDKVVDFHWNEADPWTVVSVSDDCDTSGGGGTLQIWRMSDLIY
RPEEEVLAELGQFKSHVVECTSKSLERTKKAP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccaagaaggagaggaagacctaggaaggacaagacagcagtgacggtgccg
aaacaagacagagagccaaagcacgaagaagaagaagacgaagaagaagaggaaggaagt
gagtcagacgagagaaaacagatgcgagacaagaagcctgcgcatcaatctttctccgtc
gacgagaagtacgctaaatggaaatctatcattccggtcctctacgactggctcgccaat
cacaaccttgtctggccctctctctcttgccggtggggtctgcaactcgagcaagggaaa
ttcaagaataggcaacgactctacctgtcagaacagactgatggcagtgttccaaatacc
ttggtcatagcaaattgtgaagttgtcaaaaccagggttgcggctgcagagcacatatca
cagttcaatgaagaagcacgttcaccatttgtgaagaagtacaaaactatcatacaccct
ggagaggtgaacaggatcagggaactaccgcagaataaaaatatagttgcaacccatact
gactcgcctgaagttctcatttgggatattgaagcacaacctaatcgtcatgctgtttgt
ggagcagctgattctcgtccagatttggtattgactgggcatcaagagaatgctgaattt
gctttgtctatgtgccctatggagcccttagtgttgtctggagggaaggacaggtctgtt
gttttgtggagtattcatgatcatgtgtccacattgacaacagatgcatccactaagcct
gcaggatcttccgggtcaattattaaagcttctgaaaacccttctatcgggccacgtgga
attttccaaggccacagtgacacagttgaagatgtgcaattctgtccctcaagtgcacag
gagttctgtagtgttggagatgattcttgcctaatattgtgggatgcaagagtgggctct
agcccagttgttaaggttgaaaaagcacacaatgctgatcttcattgtgttgattggagt
cctcatgatgaaaaccttattataactgggtcagctgatcattctgttcgaatgtttgat
cgccgaaatcctatttctggcggtgtaggatcacccatctataagtttgaaggtcatgaa
gctgctgtcctgtgtgtgcagtggtcaccagacagatcaacggtatttggaagttctgca
gaggatggtctcctaaatatttgggattatgagaaggttggagcaaagagagagattggg
gaaaaaacacctttttctcctccggggttgtttttccaacatgctgggcacagggacaaa
gttgttgacttccactggaatgaagccgatccatggacagttgttagcgtatctgatgac
tgcgatacctctggtggaggtggaacgctccagatttggcgcatgagcgatttgatttac
cggcctgaagaggaggttttggccgagctcgggcagttcaagtctcatgtggttgaatgt
acttcaaagagccttgagagaacgaagaaagccccgtaa
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