Diospyros lotus (date-plum): 127795788
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Entry
127795788 CDS
T10632
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127795788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dlt04040
]
127795788
Ion channels [BR:
dlt04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127795788
SSDB
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
127795788
NCBI-ProteinID:
XP_052183644
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Position
2:complement(561535..623099)
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AA seq
769 aa
AA seq
DB search
MAASEKDEVPMLSNLYSEVDEHEEFRNRRFSSRNRSASMSISMNSQETYDNESYMGHTGP
LRTARRTPFMQMSGPLYISRKHERPTQGAIRPKTSELTVEKYPSSKGMGQHDWPDNYAGK
NEHLLRSGQLGICNDPYCTTCPTYYKLNGQRKTSKSSIIFDSKFHNALYGDAKGWARRIL
SFLQQYVIGVMNPHAKVVQRWNKFFAISCLAAIFLDPLFFFLLSVQQGNKCIVINWPMTT
TLLVCRSLTDFIFFIHILLQFRLAYVAPESRVVGAGDLVDHPKKIALNYLSGYFLIDLFA
VLPLPQVVILLILPNSIGSSGANYAKNLLRLSFLVQYLPRLYRFLPLLVGQSPSGFIFES
AWANFVINLLTFVLSGHVVGSCWYLFGLQRVNQCLRVACHDSHMDMCKKFIDCGHGRNFS
SDESWHEWRNNENATDCFSEGGFSYGIYQQAVNLTTENSIMTRYIYSLFWGFQQISTLAG
NQTPSYFVWEVLFTMAIIGLGLLLFAFLIGNMQNFLQALGRRRLEMSLRCRDVEQWMRHR
RLPEELRRQVRQSERYNWAATRGVNEEMLLENLPENLQREIRRHLFKFVKKVRIFALMDE
PILDAICERLRQRTYIKGSKILYCGGLIEKMVFIVRGKMESIGEGGIILPLSEGDVCGEE
LLTWCLEHSSINKDGKKVRVPGHRLLSNRMVRCFTNVEAFTLRATDLEEVTSLFTRFLRN
PRVQGAIRYESPYWRSLAVTRIQVAWRYRKKRLSRAETSCCESNLSSRE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttccgagaaagatgaggtgccaatgctgtcaaacctgtactcagaagtggat
gaacacgaggaattccgaaatcgtaggttttcatccagaaatcggagtgcatcaatgtct
atttctatgaattcccaggaaacctatgacaatgaaagttatatgggtcatactggccca
ttacggactgcaagaagaacaccattcatgcagatgagtggtccgctatacataagccgg
aagcatgagagacccacccaaggtgcaataaggcccaaaacatccgagcttacagtggaa
aagtatccttcttctaaaggaatgggtcagcatgattggccggataactatgctggcaaa
aatgaacatctgttgaggtctgggcaacttggaatatgcaatgatccttactgcacaaca
tgccccacttattacaagttaaacgggcaacgaaagacctcaaaatcttccattatcttt
gactcaaagttccataatgctctttatggagatgcaaagggttgggcaagaagaatcttg
tctttcctgcagcaatatgttattggagtcatgaatccccatgctaaagttgttcagcgc
tggaacaaattctttgccatttcttgtcttgcggcaatcttcttagacccactatttttc
tttttgctgtctgtgcagcagggtaataagtgtatagtaatcaattggcccatgacaaca
acactcttggtttgcagaagcttgactgatttcattttctttattcacatacttcttcag
ttccggctggcatatgttgctccagagtctagagtagttggtgctggagacttagttgac
catcctaaaaaaattgctctcaattatctttctggatactttcttattgacttatttgct
gtattacctcttcctcaagtagtgatattattgatcctaccaaactctatcggatcatct
ggggcaaattatgctaagaatcttttgcgtttatctttccttgttcagtatcttccaagg
ttgtataggttcctacctttgcttgttggacagtctccaagtggcttcatatttgagtca
gcatgggcaaattttgttataaatcttctcacctttgtgttgtctggccatgttgtgggg
tcatgctggtacctctttggcttgcagagagtaaaccaatgtcttcgagttgcctgtcat
gactctcacatggatatgtgtaagaaattcatcgattgcggccatgggagaaactttagc
tcagatgaatcatggcatgaatggaggaacaatgaaaatgcaactgattgtttcagtgaa
ggaggtttctcctatggaatctatcagcaagctgttaatctcaccacagaaaatagtatc
atgaccagatatatttattcattgttctggggctttcagcaaatcagtacactggctggt
aatcaaacgccgagctattttgtttgggaagtccttttcactatggccatcattggcctg
ggcctgttgctatttgcttttctaattgggaacatgcaaaactttctacaggctcttgga
cgcaggcggctagagatgtccctcaggtgtcgtgatgttgagcagtggatgaggcatcgg
cggttgcccgaagaactaagaaggcaagttcgtcaatcagaaaggtataattgggctgcc
accagaggggtaaatgaagaaatgctacttgaaaatcttcctgagaaccttcaacgagaa
atacgacggcatctcttcaaatttgtcaaaaaggtccgtatttttgccctgatggatgaa
cctatcttagatgccatttgtgagaggctaagacaaagaacatatatcaaaggaagcaaa
attttgtactgtggtggtcttattgagaagatggtttttattgttcggggaaaaatggag
agcattggagaaggtggtatcatacttcccctgtctgaaggggatgtttgtggtgaagaa
cttctgacatggtgccttgagcattcttctatcaataaagatggaaaaaaagtccgggta
ccaggacatagactgctaagcaatagaatggtgagatgctttacaaatgtagaagcattc
acactgcgagctactgatcttgaagaagtcaccagtcttttcactagattcttgagaaac
ccacgtgttcaaggagcaataaggtatgaatcaccctactggcggagcctggcagtaact
cggattcaagtagcatggaggtataggaagaagcgtctaagccgtgcagaaacatcctgt
tgtgaatcaaatctttcttcaagggagtga
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