Diospyros lotus (date-plum): 127795817
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Entry
127795817 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127795817
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127795817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
TPR-S
HAT_Syf1_CNRKL1_C
TPR_11
Med31
TPR_1
Motif
Other DBs
NCBI-GeneID:
127795817
NCBI-ProteinID:
XP_052183683
LinkDB
All DBs
Position
2:27442176..27450544
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AA seq
665 aa
AA seq
DB search
MADVVQYKLERMVDELDDLERRGLFTRREISEIVKQRRKFEYRLKRPSPLKHDFLTYIDY
EKSLDALRLLRKKAVARQLQDQRDVENDENKKKIKMKKSVSDFAGVSRILEIYRLATTRF
KGDLELWFQYLEFCRQRKNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDQNLNAAAARSI
MQSGLRACPTSEDLWVEYLRMELTYLNKLKARKVALGEDEGTLTRNYEVAEENQWRDENK
ELFVALDKSGDNDESAALQNEESKKLDLFQEQGLSILQTIYGGAVEALPSSLSLRKRFVE
ILEAINLGRSEEMRKEILADMKRDFAKDPEYWDWLARLEITNSTSTQVLNKEITPARLDK
AIQVYEEAIEVLPSDEMFSRYTRFLREVIGQKNGDAQSPGAICPSGHALDLISHTLVVYE
RAESEGCITEDLACQYVSFYMQARRLEEARKLAEKLCNGKLSNAVELWVLRLSLEMRCVT
ERSGFPSKADLMSVFELLKSVLREMAVWKAKSLWLMGLKYFANQKHYFDKLVELALVSLT
KDGGSDNGFSLSSTIINFVLQKDGIQYARDMYKRFLALPRPGLVIYQYCIELEANLASAG
DRDGLLEARKLYESALATYKQDVSLWQNYYSMESKMGTSETANAIYWRARKSLKDKVALL
SSAHL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggtgcagtacaagctggagcgcatggtcgacgagctcgacgacctcgag
cggcgaggccttttcacgcgccgcgagatatcggagatcgtgaagcagaggaggaagttc
gagtacaggctgaagcgtccgagccctctcaagcacgacttcctcacctacatcgactat
gagaagagcctcgacgcgcttcgcctcctccgcaagaaggcggtggctcgccagctccag
gatcagcgagacgtcgaaaacgacgaaaacaagaagaagattaagatgaagaaatcggtc
tccgactttgctggagtttccaggattctcgagatttatcgcctcgccacgacgcggttt
aagggcgatcttgagctctggtttcagtatctggagttctgtaggcaacgcaagaatgga
cggatgaagaaggtcctggctcaggtgattagatttcatcccaaagtgccaggtgtctgg
atatatgctgcagcttgggagtttgaccaaaacttaaatgctgcagctgctcgttctatc
atgcaaagtgggttgagagcttgtccaacttcagaggatctttgggtggagtatcttcga
atggagcttacttaccttaataagttaaaggcaagaaaggttgctcttggagaagatgag
ggaacacttactcggaattatgaagttgctgaggagaaccaatggagagatgaaaacaaa
gaattgtttgtggcccttgacaagagtggagataatgatgaatctgcagctctccaaaat
gaagaatccaagaagttagatttgtttcaggaacaaggtttgagcattcttcaaactatt
tatggtggtgctgttgaagccctgccttcttctttgagccttagaaagcggtttgttgag
atactggaagcaataaacttaggtcgttctgaagaaatgcgaaaagagatactggctgac
atgaaaagagattttgcgaaggatccagagtattgggactggcttgcaagactagaaatt
actaattctacaagcacacaggtgttgaataaagaaatcacacctgctcggttagataaa
gcaattcaggtttatgaagaggctatagaagttcttccttcagatgagatgtttagtcgc
tatacaaggtttttgagggaggttattggtcaaaaaaatggagatgcacaaagtcctggg
gctatctgtccttctggtcatgctttagatcttatttcacatactctggtggtatatgaa
agggcagagagtgaggggtgcattactgaagatcttgcttgccaatatgtttcattttat
atgcaagcaaggagattggaggaagctaggaagctggcagaaaagctatgtaatggaaaa
ctttctaatgcagtagagttgtgggtactgaggctttcactagagatgagatgtgttaca
gagagatctggtttcccaagtaaagctgatcttatgtctgtctttgagcttctcaaaagt
gttcttagagaaatggctgtttggaaagccaagagcttgtggcttatgggcctaaagtat
tttgcaaatcaaaaacattattttgacaagctggtggaacttgccctggtttcgttaact
aaagatgggggcagtgacaatggattttccttatcttctactataataaactttgttctt
cagaaggatggaattcagtatgcaagggatatgtataagcggtttcttgctttaccccgt
cctggactcgtgatatatcaatactgcattgagttggaagcaaaccttgcatctgctggt
gatagagatggtcttctagaagcccggaaattatatgaatctgcgcttgcaacctacaag
caagatgtgagcttgtggcaaaattattattccatggagagcaagatgggaacctcagaa
acagctaacgccatctattggcgcgcacgaaagtctctgaaagacaaggttgcacttctg
tcatctgcacatttgtga
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