Diospyros lotus (date-plum): 127796057
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Entry
127796057 CDS
T10632
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127796057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127796057
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127796057
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127796057
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
127796057
NCBI-ProteinID:
XP_052184072
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All DBs
Position
1:complement(24773140..24774237)
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AA seq
283 aa
AA seq
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MVSAGLDSKPKPKPVVIREVWSGNLESEFQLIRDLIDRYPYISMDTEFPGVVFRPPASAD
PHQRRRLQPSDHYKVLKSNVDALNLIQLGLTLSDSAGNLPDLGAGESGFIWEFNFRDFDV
ERDAYAPDSVELLRRQGIDFDRNRSEGVDSGRFAELMMSSGLVCNESVSWVTFHSAYDFG
YLVKILTRRCLPGGLEDFLGILRVFFGNNVYDVKHLMRFCQSLYGGLDRVARTLEVDRAV
GKCHQAGSDSLLTWHAFQKMREMFFVTDGPEKHAGVLYGLEVF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgccggcttggattcgaagcccaaacccaaaccggttgtgattcgagaggtt
tggtcgggcaatctcgagtctgaattccagctcataagagacctgatcgatcgctaccct
tacatctctatggataccgagtttcccggcgtagttttccgcccacccgcctccgccgat
ccgcaccagaggcggcgcctccaaccttctgaccactacaaggtgctcaaatcaaacgtc
gacgccttgaatctgatccagctggggctcaccctctccgactccgccggaaacctcccg
gacctcggtgccggcgagagcggcttcatctgggagttcaacttccgggacttcgacgtg
gagcgtgacgcctacgcgccagactccgtggagctgctccgccgccagggcatcgacttc
gaccggaaccggtccgagggggtcgactcaggccgcttcgccgagctgatgatgtcgtcg
ggcctggtctgcaacgagtcggtgagctgggtgacgtttcacagcgcgtacgacttcggg
tacctggtgaagatcctcacgcgccgctgcttgccgggtgggctggaggacttcttgggg
attctgagggtgtttttcggcaacaacgtctacgacgtgaagcatctgatgaggttctgc
cagagcttgtacggggggttggaccgggtcgccaggacgctggaggtggaccgggcggtc
gggaaatgccaccaggccggttcggatagcctgctgacgtggcacgccttccagaagatg
agagagatgttctttgtaacggacgggccggaaaaacacgccggcgtcctctatggatta
gaggttttctag
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