Diospyros lotus (date-plum): 127796366
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Entry
127796366 CDS
T10632
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127796366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlt03032
]
127796366
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127796366
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127796366
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127796366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
PHD
RTT107_BRCT_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
127796366
NCBI-ProteinID:
XP_052184420
LinkDB
All DBs
Position
3:1212532..1219448
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AA seq
1250 aa
AA seq
DB search
MFAAKQGDSPIYDHPSKTFIGVRFVLHGFDPINSQKVRSKLVNGGGVDARQYGPSCTHVI
VDKLVYDDPICVLARRDGKVLVTGLWIDHSFDIGMPADPTSVMYRPLRDLDGIPGAKSLI
VCLTGYQRQDRDDIMIMVGLMGASFSKPLVANKVTHLICYKFEGEKFELAKKMKRIKLVN
HRWLEDCLKAWEILPEANYDKSGYELETMEAEAKDSEEEEAQEIGKKQNGERKINLSPHN
LHVGMIRTDPSPKSKNISMNLVANSASTGLPNAHNKNDAVLTTAEKDKSFPALNLQGTSK
KQPDVLSSRDSSALGNVTCGETSELALESHDRIIAPVKFGNDLDFTSEVVRGLLTLIQTC
QVVNYLKNAPRRKTLTMSSGGMGRNLSIPSKVLIDKVNAPEGFDISLSGVEKAKVGTDTG
SAKTPAKEARLINEEGKHGIFIEKRKMDVSYDSSKLQKTSHSPKACDSESPLFFSRTGAS
EHIVLINDASDMSATLGIGHDSPINAATTSFSSYDRKSLKKSVLNSSVSENKQEVNLVAP
QTSSIGFKSMNLGSEHGIKNVFNKAENPIGEVGKPQEEMQNVHAPSPQIKGLETDKSNSP
SMDLFKGISTASVSKPVRRKVIAKKSLGCKPNVGPGSARSHRGPIFLSETAFRSDAATCL
SSGQETTSRRMTVEPENAKNFPPTANDNGGVLVETENLEKLGDEVVNKMASMDDETENPE
DKVENEFDGAGGEEKLKEVNTTNEMNMATKDKSEDSQLTTRQANANSLRPHNDTEISNGD
ENGAEVEKEASGREDVLAESTTCEGGGKLAKQENFKVGKTLRKPAPYITKRKKSKQVLGE
ESTIRTIRMNQMIKKNIQMAKSRELNFXVRKDSMEIGKENRPVDIGDKNVNLGEQQVGKV
AVKSGRTPIKVDPKACMSDQDSIPEERVLKMKAEPAWFILSGHKLQRKEFQRVIRHLKGR
LCRDSHQWSYQATHFVVPDPIRRTEKFFAAAASGRWILKTDYLTESNQAGRFLREEPFEW
HKNGLSEDGAINLEAPRKWRLLRERTGHGAFYGMRIVIYGECIAPPLDTLKRVIKAGDGT
ILATSPPYSRFFNSGVDFAIVSXGMPRVDMWVQEFLGHEVPCVTADYLVEYVCKPGFSLE
RHVQYNTHAWAEKSFANLQARLHEVVELQTTCKGNADDDLQCQVCGSADRGEVMLICGDE
GGSTGCGVGVHIDCCNPPLEQVPDEDWFCPKCSETRNGVNCRKKGISKGK
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagccaaacaaggcgattcaccaatttatgaccacccttccaaaactttcatc
ggcgttcgcttcgtcctccatggattcgatcccatcaattcccaaaaggttcgatccaag
cttgttaatggcggcggggttgatgcgcgtcagtatggtcccagttgcactcacgtcatc
gttgacaagcttgtttatgatgatccaatatgcgtgctggctcggagagatgggaaggtt
ttagtcacaggactatggattgaccatagtttcgatattggcatgcctgctgaccctaca
tctgttatgtacagaccattaagagatttggatggaattcctggtgccaaatctttaatt
gtatgcttgactgggtatcaaaggcaagatagagatgatattatgataatggttgggcta
atgggggcaagtttttcaaagccattggtagcaaacaaagttactcatcttatatgctac
aaatttgaaggagagaagtttgagcttgcaaagaaaatgaaaaggattaagcttgttaat
catcgatggttggaagactgtttgaaggcttgggaaattcttccagaagctaattatgat
aaaagtggctatgaattggaaacgatggaggctgaagccaaagattctgaagaagaagaa
gcacaagagattggtaaaaagcaaaatggggagagaaagatcaatcttagccctcataat
ttgcatgttgggatgataagaaccgatccatctcccaaatcaaaaaacatctcaatgaac
ctggtagctaatagtgcttccacaggtttaccaaatgctcacaataagaatgatgcagta
ttaactactgcagaaaaggacaaatcctttccagctttgaatttgcaaggtacttctaag
aagcaacctgatgtgcttagttctcgggacagcagcgcactaggaaatgttacttgcggt
gagacatctgagttggcacttgaatcacatgatagaatcatagctcctgtcaagtttgga
aatgacttggattttacatctgaagtggtgagaggtctcctcactctgattcagacatgc
caagtagtaaattacttgaaaaatgcacctagaagaaaaacacttacaatgtcatcagga
ggaatggggagaaatttaagcatccctagtaaggtacttattgataaggtgaatgcacct
gagggttttgacatatctttgtctggagtagaaaaggctaaggtgggaactgatactgga
tctgccaaaactcctgcaaaagaagctcggttaatcaatgaagagggaaaacatggtatc
tttattgaaaagcggaagatggatgtttcttatgatagctcaaaattgcaaaagacgagt
cacagtccaaaagcatgtgattcagaaagtccattattttttagcagaacaggtgcttca
gaacacatagtcttgataaatgatgcatctgacatgagtgctactctgggtataggacac
gactctcctatcaatgctgcaacgacaagcttctcaagttatgatagaaaatcactgaaa
aagtctgtcttaaatagttccgtctcagagaataagcaagaggtaaacttggtggcacct
caaacatcttcaattggatttaaaagtatgaacttgggcagtgaacatggcattaaaaat
gttttcaataaagcagagaatcctattggtgaagttgggaagccacaggaggaaatgcaa
aatgtccacgccccatctccacaaattaaaggattggagactgataaatccaacagtcct
agcatggatttgttcaaaggaataagtactgcctcagtttcgaagccagttaggaggaag
gtgattgccaagaagagtttgggctgtaaaccaaatgtgggtcctggtagtgctagaagt
cacagaggccctattttcctaagtgaaactgccttccgatctgatgctgccacctgttta
agtagtgggcaggagacaacatctaggaggatgactgttgaacctgagaatgccaaaaat
ttccctccaactgccaatgacaatgggggtgttctagtggagacagaaaacctagaaaag
ttaggggatgaagttgtgaataagatggcatccatggatgatgagactgaaaatccagag
gacaaagtggaaaatgagtttgatggggctggtggtgaagagaagcttaaagaggttaac
acaacaaatgagatgaatatggcaacgaaagacaaatcagaggattctcagttgacaaca
aggcaggctaatgctaacagtttgagaccacacaatgatacagaaatttcaaatggagac
gaaaatggtgctgaagttgaaaaggaagcttctggcagggaagatgtgcttgctgaatca
acaacttgtgagggtggtggaaaattagccaaacaggaaaattttaaagtaggtaaaact
ttgagaaagcctgctccttacattacgaagagaaaaaaatcaaagcaagttttaggggag
gagtccacaataagaacaataagaatgaaccaaatgatcaagaaaaatatccaaatggca
aaatcaagagaactaaacttttgagtaagaaaggattccatggaaataggaaaggaaaat
aggcctgttgatattggtgataaaaatgttaatcttggtgaacagcaggttgggaaagtg
gctgtaaaatctggcagaacacctattaaggttgatccaaaggcttgcatgagtgatcag
gattcaataccagaggaaagggttctgaaaatgaaagctgagcctgcttggtttatacta
agtggccataagctacaaagaaaggagtttcagcgggttattagacatttaaaaggaagg
ctatgtagagattcccatcagtggtcataccaggctacacactttgtagttccagatcct
atacgcagaacagaaaagttttttgctgctgcggcatctggaaggtggattctgaagact
gattacttgacggagagtaatcaggcaggaagattcttaagagaggagccttttgagtgg
cacaagaatggtctaagtgaagatggtgcaatcaacttggaggccccaagaaaatggcgt
cttttgagggagagaactggtcatggggccttttatggaatgagaattgtcatatatgga
gaatgcattgctccacctttggacactctaaagcgtgttatcaaagctggagatgggaca
atattagcaacctctcccccatacagccgcttctttaattctggagttgattttgccatt
gtaagtnccggcatgccacgtgttgatatgtgggtacaagagtttttaggacatgaggtg
ccatgtgttacagctgattacttggtggaatacgtctgcaagcccggtttttcacttgaa
agacatgtgcaatacaacactcatgcttgggcggagaagtcatttgctaaccttcaggct
cggttgcacgaggttgttgagttacagacaacatgtaaaggaaatgctgatgatgattta
caatgtcaagtttgtggatctgcagacagaggagaggtaatgctaatttgtggtgacgag
ggtggttctactggttgtggtgttggtgttcatattgattgctgcaaccctccattggaa
caagtcccagatgaagactggttttgcccaaagtgtagtgagaccagaaatggagttaat
tgtcgtaagaaagggatctctaagggcaaatga
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