Diospyros lotus (date-plum): 127796500
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Entry
127796500 CDS
T10632
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127796500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127796500
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
127796500
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127796500
mRNA degradation factors
5'-3' decay
Decapping complex
127796500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
127796500
NCBI-ProteinID:
XP_052184619
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Position
3:15040933..>15053286
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AA seq
257 aa
AA seq
DB search
MSGLNRSSSVPSKNGFPPQELLDDLCSRFVLNVPKEDLESFERILFLVEYAHWFYEDNSV
EKNPSLKSFTLKEFTTLIFNNCDVLRPYVPHIDDIFKDFTSYKVKVPVTGAIILDESYER
CLLVKGWKGTSWSFPRGKKNKDEEDHKCAIREVLEETGFDVSKLINKYEYIEKKFGQQRV
RLYIIAGVRDDTAFAPLTKKEISEIAWQRLDELQPASDDVISRGMTGLKLYMVAPFLASL
KDWILGHQPLVAPKSFL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtctcaatcgatcttcgagtgttccatccaagaacggcttccctccccaagaa
ctcctcgatgatctgtgcagtcggtttgtgctgaatgtgccaaaagaagatctagaatca
tttgagaggattttatttcttgtggaatatgcccattggttctatgaggacaattctgtg
gaaaagaacccgtcgctgaaatcattcactctgaaggagtttactactttgatatttaac
aactgtgatgttttaagaccttatgttcctcatatagatgacattttcaaggacttcact
tcgtacaaagttaaggttcctgtaactggggccatcattttggatgagtcttatgaacgg
tgcttgctagtgaaaggatggaagggaacaagttggagtttcccccgtgggaaaaagaac
aaagatgaggaagaccataaatgtgcaattagagaggtccttgaggaaacaggttttgat
gtttcaaaacttataaacaaatatgagtatatagagaagaaatttgggcagcaaagggtg
cggctctacattattgctggagtcagagatgatactgcttttgccccacttacaaaaaag
gagatcagtgaaattgcgtggcagcgtcttgatgagcttcagccagcaagtgatgatgta
atatctcgtgggatgactggcctcaagctttatatggttgccccgttcttggcatctttg
aaagattggattttaggacatcagcccctagtagcaccaaaatctttcctttga
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