Diospyros lotus (date-plum): 127796721
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Entry
127796721 CDS
T10632
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127796721
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dlt01002
]
127796721
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127796721
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127796721
Peptidases and inhibitors [BR:
dlt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127796721
Ubiquitin system [BR:
dlt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127796721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Malt_amylase_C
Nitroreductase
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127796721
NCBI-ProteinID:
XP_052184997
LinkDB
All DBs
Position
3:26231647..26289855
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVLTPAPIDQEDEEMLVPHSDLVEGPQPMEVVAQGEAGNATENQQVEDPQSSRFTWRIE
NFSRLNAKKLYSEIFVVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSL
SVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMGLSDLYDPCRGYLLNDTCIVEAEVIVR
RVVDYWAYDSKKETGFVGLKNQGATCYMNSLLQFLYHIPYFRKAVYHMPTTENDIPSASI
PLALQSLFYKLQYSDSSVATKDLTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPVQLDLDRE
NGKYLSPDADRRVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDIK
RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKVICNVDEKDIAEHL
RERLKREQEEKEIKKKEKAEAHLYTIIKVARDEDLVEQIGRDIYFDLVDHDKVRSFRIQK
QMPFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKV
HNAELKLFLEVEFGLDLRPIPPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKAMGKPTE
ILTNLNEMAGYAPDEEIDLYEEIKFEPQVMCEPIDRKFTFRSSQLEDGDIVCFQKSLPVD
VGDRFRYPDVPSFLEYVRNRQVVHFRALEKPKEDDFCLELSKLHTYDDVVERVARQLGLD
DPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVTFHHATKDEVSIHTIRLPKQSTVGDVINELKTKVELSHPSAELRLLEVFYHKIYKI
FPSSEKIENINDQYWTLRAEEIPEEEKNLSPHDRLIHVYHFTKETAQNQMQQIQNFGEPF
FLVIHEGETLAEVKERIQKKLQVPDEEFVKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHSDNAPKRAYAANQNRHAFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcttgactcctgccccaattgatcaagaggacgaggagatgctcgtcccgcat
tcggatttggtcgagggtccccagcccatggaagttgtggcacaaggagaggcaggcaat
gctactgagaatcagcaagtcgaggacccacaatcatcaaggttcacatggaggattgag
aacttttctaggttgaacgcaaagaagctttactcggaaatttttgttgttggtggttat
aaatggcgtattctaatttttccaaagggaaataatgtcgaccatttatccatgtatctg
gatgttgcagattcagcgacgttaccatatgggtggagtagatatgcacagtttagttta
tctgtagttaatcaaattcatagcaagtattcaatcagaaaagacacacaacatcagttc
aatgcccgggaaagtgattggggtttcacatcttttatgggccttagcgatctgtatgat
ccttgcagaggttatcttctgaacgacacatgtatagttgaagctgaggttattgttcgt
agggttgttgattactgggcatatgattcaaagaaggaaactggttttgttggattgaag
aatcaaggagcaacttgttacatgaactctctccttcagttcctctatcacattccttac
tttaggaaggccgtctatcacatgcctactacagagaatgatataccatctgcaagcatc
cctctggctttgcagagcttattttacaaactccaatatagtgacagcagtgttgccacc
aaagatcttaccaaatcctttggatgggacacatatgattctttcatgcagcatgacgtg
caagaacttaatagagttctgtgtgaaaagcttgaagacaaaatgaagggaactgtcgtg
gagggcactatacagcaattatttgaaggacatcatatgaactacatagaatgcatcaat
gtggactataaatctactagaaaggagtctttttatgatcttcagcttgatgtcaaaggt
tgccgtgatgtgtatgcgtcttttgacaagtatgtggaggttgaacgtcttgaaggtgat
aacaaatatcatgctgagcaatatggtttgcaggatgctaaaaagggtgtcttgttcatt
gatttccctcccgtccttcagcttcagctgaaacggtttgaatatgattttatgagggac
actatggtgaagattaatgatcgttatgagtttcctgtgcaacttgatcttgatcgagaa
aatggaaaatacttgtcaccagatgctgataggagagttcgaaacctctacacacttcac
agtgttctagtccatagtggtggtgtccatggtggacattattatgcctttatacgacca
actctttctgaccagtggtataaatttgatgacgaacgggtgacaaaagaagatattaag
agggctttggaggagcaatatggtggtgaagaagagttaccacagacaaacccaggattc
aataatacaccttttaaattcactaagtattcaaatgcgtacatgttggtgtacatacgt
gaaagtgacaaggagaaagtaatttgtaatgtggatgagaaggacattgctgaacatctc
agggaaagattgaaaagagagcaagaagaaaaagagatcaagaagaaagaaaaagctgag
gctcacctttataccatcatcaaggttgcacgagatgaagatcttgtggagcaaattgga
agagatatatattttgatcttgtggatcatgacaaagttaggagctttcgtattcagaag
cagatgccttttaacctttttaaggaggaggttgctaaagagtttggcatacctgtgcaa
tttcagcggttttggctatgggcaaagcgccaaaaccatacatatcgacccaatcgacct
ttgacacatctagaggaaacacaaacagttggacagttgagggaggtatccaataaggtt
cacaatgcagaactgaagttatttttagaagtggagtttggactggatttaaggcctatt
cctccacctgataagacaaaagatgatattttactttttttcaagctttatgatcctgag
aaagaagagctacgttatgttggaaggctttttgtaaaggctatgggtaagccaacagaa
attttaacaaatctaaatgaaatggctggctatgcccctgatgaagagattgacctttat
gaggagataaagtttgaaccacaagtcatgtgtgaacccattgacaggaaattcacattt
cggtcaagccagcttgaagatggtgatattgtttgtttccaaaaatctcttccagttgac
gttggtgatcgattccgctaccctgatgtcccctcattcttagaatatgtgcgcaatcgc
caggttgttcacttccgagcccttgaaaagcccaaggaggatgatttctgtttagagttg
tcaaagcttcatacatatgatgatgttgttgaacgggtagctcgccagcttggtttggat
gatccatccaaaatcaggcttacctctcataactgttactcgcagcaacccaaaccccag
cccattaagtaccgtggggtggaccatttgtcagatatgctggttcactacaatcagact
tctgatatattgtactatgaagtattggacataccactgccagagttgcaaggcctgaag
actcttaaagtaacttttcaccatgctacaaaagatgaagtgtccattcacactattaga
ctgccaaaacaaagcactgtgggtgatgttattaatgaacttaagaccaaggttgaattg
tctcacccgagtgcagaactcagactacttgaagttttctaccataagatttataagatc
tttccttccagtgaaaaaattgagaacataaacgatcagtattggaccctacgagcagaa
gagattccggaagaagagaaaaatctcagtcctcatgatcgcttgattcatgtatatcac
ttcacaaaagagaccgctcagaatcagatgcagcagattcaaaactttggagaaccattt
ttcttggtcatacatgaaggtgagactttagctgaggtgaaagagcgaatacagaagaag
ctgcaagttccagatgaggaatttgttaagtggaaatttgcatttctttctctaggtcga
ccagagtatcttcaggactctgacatagtctccagtcgctttcagagaagagatgtttat
ggtgcttgggagcagtatcttggactggagcactctgacaatgctcctaaaagggcttat
gcagctaatcagaaccggcacgcattcgaaaagccagtgaaaatctacaactaa
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integrated database retrieval system
