Diospyros lotus (date-plum): 127796781
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Entry
127796781 CDS
T10632
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127796781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127796781
Spliceosome [BR:
dlt03041
]
Complex A
Other components
Complex A specific factors
127796781
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Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_5
PHD_4
KH_PNO1_2nd
Tuftelin_like
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
127796781
NCBI-ProteinID:
XP_052185123
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Position
3:complement(36872850..36879317)
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AA seq
797 aa
AA seq
DB search
MESLGSHLTEPNSQFQNSAETLGSYNHVSYEALASSGQQAPQALGSGENPFHSVASDDPK
QAVSNAENGHKEFGEKASEDAQIHKPLVCENGLTNAHSGTDRDCSGGEEETSSRRRRRSR
WDPPPSDSNDGAACSDGTGTGGRKRKSRWADEEPKPVIQLPDFMKDFTGGFEFDPEIQAI
NSRLLEISRKLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLNRERQEIIS
QIIKKNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIV
IRGKGSVKEGKLLQKRDLKPDPSENEDLHVLVEADTQESLDAAAGMVEKLLQPVDEVLNE
HKRQQLRELAALNGTIRDEEYCRLCGEAGHRQFACPSRTSTFKSDVLCKICGDGGHPTID
CPVKGTTGKKMDDEYQNFLAELGGAVPDSLSKQSSGILALGSGSSGSNLPWASGNGAGGT
TQAGLGTNGVKKEYDDTNLYIGYLPPTLDDDGLIRLFTPFGDIVMAKVIKDRVTGLSKGY
GFVKYSDVQQANNAIASMNGHRLDGRTIAVRVAGKPPQPAVPPGPPTSAVPTYPVQSHAA
GAYPSQQFTQGGPLGNAPPGSYAAAPVPWAPPVPPPYASYPPPPPGSAVYTPIPGQPLPA
YGVQYPPPMTVSSATSSETVSSGELQQSYPPGVQSQSTSSVQGVPSNVYGNSAAAMPPDI
QPAYPTSFAYPSYYGVAPQQPPPPPPPPVSQPALDQPPSIGNVPWAPNPPVPRPVTTADK
TTYGADTEYEKFMAEMK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcttggatcgcacctcacggaaccgaattcccagtttcagaactcggccgaa
accctaggctcctacaaccatgtttcgtacgaggctttggcgtcttccggtcaacaggct
ccccaagccctaggttcgggagaaaatccttttcactctgttgcttccgatgatccgaag
caggccgtttcgaacgcggaaaacgggcataaggagtttggagagaaggcgtctgaggat
gctcagattcacaagccgttggtgtgtgaaaacggtttaaccaacgctcacagcggaacc
gacagggactgctctggcggggaggaggagacgtccagcagacggaggaggcgtagccgc
tgggacccccctcctagcgattcgaatgatggtgctgcctgcagcgatggtactgggact
ggcggcaggaagaggaagtcccggtgggctgatgaagaaccgaaaccggtaattcagttg
cctgatttcatgaaagatttcactggaggttttgagtttgaccctgaaattcaagcaatt
aatagtaggcttcttgagataagtagaaaattgcaatctgggttaccgctggatgaccgg
cccgagggtgctcgatcaccttcgcccgaacccatatatgataacatgggaatacgaata
aacactagggaatatagggcccgtgaacgattgaacagggagaggcaagaaattatatca
cagattattaaaaagaatcccgcatttaagcccccggctgactatcggccaccaaagctt
cacaagaagctttacataccaatgaaagagtacccaggctataatttcattggacttatt
attgggccaagggggaacacgcagaaaagaatggaaaaagagactggagctaaaattgta
attcggggtaaagggtcagtgaaagaaggtaaattactccagaagagggacttaaaaccc
gatccatcagagaatgaggatttacatgtcttagtggaagcagatacacaagaatccctt
gatgctgcagcaggcatggtggaaaagctcttacagcctgttgacgaagtccttaatgaa
cataagaggcaacagctcagggaacttgctgctttaaatggaactataagagatgaggag
tattgtagattatgtggtgaagcaggccacagacagtttgcttgtccttctcgtacttca
actttcaaaagtgatgttctctgtaaaatatgtggtgatggtgggcatccaaccattgat
tgtccagtgaagggaacgacaggtaagaaaatggatgatgagtatcagaacttcttagca
gagttaggaggggcagtccctgattctttgtctaagcaaagcagtggaattctagccctt
ggttcaggcagttcgggaagcaatcttccttgggcaagtggtaacggtgctggtggcacc
acacaagcaggcttggggacaaatggagtaaaaaaagaatacgatgatacaaatttatac
attggttacttgccacctactcttgatgatgatggcttaatcaggttgtttacacctttt
ggtgatatagtgatggctaaggttattaaggaccgggttactggattgagcaagggttat
ggttttgttaaatattctgatgttcaacaggccaataatgctattgctagtatgaatggc
catcgtctagatggtagaacaattgctgtgagagttgctggtaagcccccccagcctgct
gttcctccaggtcctcccacttcggctgtccctacatatcctgttcaaagccatgctgct
ggtgcctatccatcccagcagtttactcaaggtggtccacttgggaatgcacctcctggg
agctatgctgctgctccagttccatgggcaccacctgtacctcctccttatgcttcttat
cctcctcccccaccaggatcagccgtgtatacccctatcccaggtcaaccactgcctgct
tacggagttcaatatcccccaccaatgacagtttcttctgccacatcatcagagactgta
tcttctggtgaattacaacaaagctacccacctggggtgcaatctcaaagtacctcttct
gttcaaggtgttccttccaatgtatatgggaactctgcagcagcaatgcccccagacatt
caacctgcttatccaacttcttttgcttacccatcctattatggtgtagctccccaacaa
ccccctcctcccccacctcctcctgtgtctcagccagcactggaccagccaccgagcatt
ggaaatgtcccttgggcaccaaatccaccagttcctcggcctgttacaacagctgacaag
actacttatggtgcagatacagagtatgagaagttcatggcagagatgaagtag
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