Diospyros lotus (date-plum): 127797174
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Entry
127797174 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127797174
Spliceosome [BR:
dlt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127797174
Complex B
127797174
Complex C
U2 SnRNP specific factors
127797174
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NCBI-GeneID:
127797174
NCBI-ProteinID:
XP_052185754
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Position
3:complement(1136171..1146593)
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AA seq
773 aa
AA seq
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MSKRKFGFEGFGISRQTTYNFERSQAPQRLYVPPSSRSGGHDNYEDTDLDNIEYDDREGS
TNDAVDNDGGGGSDEIDPLDAFMEGIHEEMKAAPPPKPKEKLEKYRDDEEEDDPVESFLK
AKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMLEYDSDDNPIVLDKKKIEPILPLDH
SSMEYEPFNKDFYEEKPTISGMSDQDVVEYRKSLAIRVSGFDVPRPIKTFEDCGFSVELM
KMIAKQAYERPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELGKEE
GPIGVICAPTRELAHQIYLEAKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPG
RLIDMLKMKALKMFRTTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKV
EKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDVEKMHWLLERLPGLIDDGDVLVFA
SKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKSGIYHVLIATDVAARGLDIK
SIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELVNSLIAAGQNV
SIELMELAMKDGRFRSKRDARKGGGKMAKGRGGGGRGVRGVDYGMGIGYSPDSSNTSSSS
VPSRSSVPNRSAAVSSLRTGMMAQFKSNFVAASSNPQSQAVNNSSGTFANKRMALPGFVS
GGSIGGDITRTNTSSTPAPMSNPTNHGSGGNASQQIPERDRPRERRRPSGWDR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggaagttcggattcgaaggattcggcatcagtcgccaaacaacgtacaat
ttcgagaggtctcaagcgccgcagagactctacgtcccaccatcttcccgctccgggggc
catgacaactacgaggacaccgacctggataacatcgaatacgatgaccgagagggttct
acgaacgacgccgtcgacaacgacggcggcggcggcagtgacgaaatcgatccgctcgat
gcgttcatggaggggattcacgaggagatgaaggctgcgccgcctcccaagcccaaggag
aagttagagaaatatagggacgacgaggaggaggacgatccggtagagagtttcttgaag
gctaagaaggatttagggttgacattggcttcggaggccctccacgccgggtatgattcg
gatgaagaggtttatgctgccgccaaggcagtcgacgccggaatgttggagtacgactcg
gatgacaatcccattgtgcttgacaaaaagaagattgagccgattttacctttggatcat
agctcgatggagtacgagccgttcaataaggacttttatgaggaaaaacctaccatatca
ggtatgagtgaccaagatgttgttgaatacagaaagagcctggctattcgtgtgtctggt
tttgatgttccaaggccgatcaagacatttgaagactgtggattttctgtggagttaatg
aaaatgattgctaaacaagcttatgaaaggcctacaccaatacagtgccaagctttaccc
attgtgctttctggaagagacatcataggtattgcaaaaactggttcaggaaaaacagct
gctttcgtgcttcctatgattgtccatattatggatcagcctgaacttgggaaagaagaa
ggtccaattggagtgatatgcgctcctacaagagaattagcacatcaaatatatttggag
gcaaagaaatttgcaaaatcacatggtatacgtgtctctgcagtctatggtggaatgtcc
aaacttgagcagttcaaagagctcaaggcgggatgtgaaatagttgtcgctactccaggc
agattgatagacatgctcaagatgaaggctttgaaaatgtttaggacaacttacctggta
cttgatgaagctgatcggatgtttgaccttggatttgagccacaaataaggtccattgtt
ggtcagattaggccagatcgtcaaactttactattttcagcaacaatgccccgcaaagtt
gaaaaattggcaagggaaatccttactgatcctgtaagagttactgttggggaggttgga
atggctaatgaggatatcactcaagttgttcaagtaattccgtctgatgttgagaagatg
cattggcttcttgagaggctacctggacttattgatgatggcgatgttctagtttttgct
tcaaaaaaggccaccgtggatgaaattgagtcacaattagctcagaggggatttaaagtg
gcagcacttcatggcgacaaagaccaggcttcccggatggagacactgcaaaagtttaaa
tctggaatttatcatgtgcttattgcaactgatgttgctgctcgtggtcttgacattaag
tcgattaaatcagtggtcaactttgacatagcaagagatatggacatgcatgtccatcga
attggaagaacaggccgtgctggtgacaaagatggaactgcatacactcttatcacacag
aaagaggcaaggtttgcaggtgaactggttaacagtttgattgctgctggtcagaatgtg
tccatagagctcatggaacttgccatgaaggatgggagattcagatccaagcgtgatgca
agaaaaggaggtggaaaaatggctaaaggaaggggaggtggtggccggggcgtgcgaggt
gtggattacggaatgggcattggatatagtcctgactccagtaacacatcatctagctct
gtccctagtcgttcctctgtccctaatcgttccgctgctgttagttcactgagaaccgga
atgatggctcagttcaaaagcaactttgtggccgcatcgtcaaatcctcaaagtcaggcc
gtaaacaacagttcaggcacctttgccaacaagagaatggcgttgcctggttttgtttcc
ggtgggtcaatcggaggtgatataactcggacaaatacttcatcaacgcctgctcctatg
tcaaaccccactaatcacggctccgggggaaatgcaagtcaacagattccagaaagggat
agaccaagagaaaggcggaggccctctggctgggaccgttag
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