Diospyros lotus (date-plum): 127797190
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Entry
127797190 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127797190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127797190
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127797190
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
127797190
NCBI-ProteinID:
XP_052185776
LinkDB
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Position
3:38975704..38984020
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AA seq
250 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIRESEVEDLFYKYGRILDIELKIPPRPPCYSFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGGGSAGRYGISRHSEYRVIVRGLP
SSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTR
TYIRVKRYESSPSRSRSRSRSPPRRNRSRSPEHSASRSPSRSRSQSPLRSTRPRSRSRSA
SPRQARSGSG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgaacaatttacgttggtaacctgcctgcagacataagggaa
tcggaagttgaagatctgttttacaagtatggtcgtatattggatattgaattgaagatt
cctccacggcctccttgctatagttttgtggagttcgagaatgctcgggatgctgaagat
gcaatcagaggacgggatggctacaactttgatggttgtcggttaagggttgagcttgcc
catggtggtagaggtccatcttcttcaagtgatcgtcgtggtagttatggtggtggtagt
gcggggcgttatgggatttcacgtcattctgagtaccgagttattgttcgtggtcttcca
tcatctgcttcatggcaagacttgaaggatcatatgcgaaaagctggtgatgtgtgcttt
gctgaagtttcccgggacagcgagggaacctttggtcttgttgattataccaattatgag
gacatgaaatatgctattcggaaacttgatgatactgaatttagaaatccttggaccaga
acttatattcgggtgaagaggtatgagagcagtccatcaaggagccgcagtagaagcaga
agccctccaaggaggaataggagcagatctccagaacattctgcatccagatcaccatca
agatctagatcccagtctcctttgaggtcaacaagaccaagatcaaggtcgaggtcagca
tctcctcgtcaggcacgatctggcagtggctga
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