| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH11 isoform X1
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| KO |
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| Organism |
dlt Diospyros lotus (date-plum)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dlt00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127797192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dlt03019]
127797192
Enzymes [BR:dlt01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127797192
Messenger RNA biogenesis [BR:dlt03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127797192
mRNA degradation factors
3'-5' decay
Ski complex
127797192
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(31764157..31842307)
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| AA seq |
1400 aa
MDRIVAAKELAFRVGFTGYSGHLRVEPLSPLERPNGLSSLPDFVPELWLLVVQNGEKRIP
VADRFKPPAFPRETPESIKEYIEEKYLFPRLDADEFSPEKAGRQWEFDWFSKSKIHLEPS
LPRTVVVPTWELPFRHPKNGLGKGKCEPISVQGEVSGLTVGAEGSAGLPRMAGPTKDFVK
GSLNNRPFRPGGLDDSQALEKLLPMGVSNGEWVWEVINGGPSQTIPPGFKHGVDLDDLKA
HPYSWTVCEDQNAVESASDEKLNEFSVQFDDLFKKAWEEDVGEFARDGIVVINLLSKPIP
SVYLQLPFNSLHYHGHNSELEAEVHEESIELQPEANKENAPGGIDTESLVLDEILSVESG
RSTSRLNETSDSGAEAAEQDKEAWAISGGSEGVAEHFHELVPDMALEFPFELDKFQKEAI
YYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKFDV
GLLTGDISLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEV
IIMLPRHINIILLSATVPNTIEFADWIGRTKQKKIRVTGTTKRPVPLEHCLFYSGELYQI
CESEIFMPQGVKTAKEAYKRQKATHGGSSGKYPGFSSGHDGSRPQKRENSHGRHNKHSGS
HNLGSFSGMGGGNQHNASNRGSWRSEASLWLLLINKLSRKSLLPVIIFCFSKNRCDKSAD
NITGIDLTSNSEKSEIRVFCDKAFSRLKGSDRNLPQVVRVQNLLRRGIGVHHAGLLPIVK
EVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLIPGEYTQMAGRA
GRRGLDKIGTVVIMCRDEIPEESDLKCAIVGSATRLESQFRLTYIMILHLLRVEELKVED
MLKRSFAEFHTQKKLPEKQQLLLRKLAQPVRTIECIKGEPAIEEYYEIYSEAEKYSNQIS
EAIVQSPSSQQFLMPGRVMVVKSQSAQDHLLGVIVKSPSANAKRYITLVLTPELPSTFQG
PLTGGNLQDKKSPDFQILVPKAKRGLDDDYYSAVTSRKGSGIINLILPHRGIAAGVNYEV
REIDNKDILSICSCKIKIDQVGLLQDISSAAYSKTVQQLLDKKSDGKYPSALDPVKDLKL
NDMNIVEVYYKWNNLWPKMAQNKCHGCVKLEEHIRLAKEMMKHKEEVNALMFQMSDEALQ
QMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAM
AIMSALVFQQRNTSEPSLTPKLFQAKKRLYETAIRLGELQAHFKLQISPEEYAQENLKFG
LVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNAASIMGNSALYKKMEA
ASNAIKRDIVFAASLYITGL |
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| NT seq |
4203 nt +upstreamnt +downstreamnt
atggacaggattgtggccgcgaaggagctcgcctttcgagtcggattcactggctacagt
ggccacctcagggtcgaacccctctcgccactcgaacgccccaacggtctcagctctcta
cccgattttgtgccagaactgtggctgttggtagtgcagaatggagagaaaaggatccct
gtagctgataggttcaagccacctgcatttcctagggaaactcctgaatctataaaagag
tacatagaggagaagtatctctttccaagattggatgctgatgagttttctccagaaaaa
gctggaaggcaatgggaatttgattggttcagtaaatctaaaattcacctagagccatca
ttgccccggactgttgtagttcccacttgggaattgccatttagacaccccaagaatgga
ttggggaaaggaaaatgcgaacccatctcggtgcagggggaggtatcaggactcacggta
ggggctgagggatctgctggtttgccacgcatggctggacctacaaaagactttgtgaag
ggaagcctcaataaccgccctttccgtccaggtggtttggatgattcccaagccctggag
aagcttcttcctatgggtgtctctaatggggaatgggtatgggaggtaattaatggtggc
ccttcccaaaccattcctcctggcttcaagcatggagtggatcttgatgatctcaaggca
catccctactcatggacagtttgtgaggaccaaaatgctgttgagagcgcatctgatgaa
aagctgaatgagttttcagtgcagtttgatgacttatttaagaaagcatgggaagaggat
gttggagaatttgcgagagatgggattgtggtaatcaacttactcagcaagccgattcct
tcagtttatctacagctacctttcaactctctacattaccatggtcacaattcagaattg
gaagctgaagtccacgaggaatctattgagttgcaacctgaagctaataaggaaaatgca
cctggtggtattgacactgaatctctggtcctggatgagattttgtcagttgaatctgga
aggtcaacttcaagactgaatgaaactagtgatagtggagcggaggctgcagagcaggac
aaagaggcctgggcgattagtggaggtagtgaaggggttgctgaacattttcatgaactt
gttccagacatggcacttgagtttccttttgaacttgataaattccaaaaggaggctatc
tattaccttgaaaagggggattctgtttttgttgcagcccacacatcagctgggaagaca
gttgttgcagaatatgcatttgctctggcatcaaaacactgcacgagagctgtatatact
gctccaattaaaaccattagcaaccaaaagtacagggacttttgtgggaaatttgatgtt
ggccttctgactggggatattagcttgaggccggaggcttcttgtcttatcatgaccact
gagatactaaggtcaatgctttacagaggtgctgatatcatacgtgacattgaatgggtt
atctttgacgaagtgcattatgttaacgatgtggaaagaggtgttgtttgggaagaagtt
attattatgcttccaaggcatattaatattatccttctttctgccacggttccgaacacg
attgagtttgctgattggattggtcgcacaaaacaaaagaaaattcgtgtaactgggaca
acaaagagaccagttccattggagcattgtctcttttattctggagaactttaccaaatt
tgtgaaagcgaaatcttcatgcctcagggtgtcaaaactgctaaggaggcatacaagaga
caaaaggcaacacatggtggttcttcaggaaaatatcctgggttttcatcaggccacgat
gggagtagacctcaaaaacgtgaaaattctcatggaagacataataaacattctggttct
cacaatttgggtagcttctctgggatgggtggtgggaaccaacataatgctagcaatcgt
gggtcctggagatcagaagcatccttgtggctgttgcttatcaataagctctcaaggaag
tcattactacctgtgattattttttgcttctcaaagaatcgctgcgacaaatcagctgac
aatataacagggatcgacctcacaagtaattctgagaaaagtgaaatacgagtcttctgt
gacaaagcattttcgaggctaaagggatctgacaggaatctaccacaggtggtcagagtt
caaaaccttctccggagaggtattggtgtgcatcatgcaggtctacttccaattgttaag
gaagttgttgagatgcttttctgtcgtggggtgattaaggttttattttcaacagagaca
tttgctatgggagttaatgccccagctaggacagtggtttttgataccttaaggaaattt
gatggcaaggaatttagacaattgattcctggagaatacactcaaatggctggtcgtgct
ggcaggagagggcttgacaaaattggtacagttgtcataatgtgtcgcgatgaaattccc
gaagagagtgatttgaaatgtgccattgttggcagtgcaaccaggcttgaatctcaattt
cgactgacctacatcatgatcttacatctccttcgtgttgaagaactgaaggttgaggac
atgttgaaaagaagttttgctgaatttcatactcagaagaaacttccagagaaacaacaa
cttctactgcgaaaacttgctcagcccgtaagaactattgagtgtataaaaggtgaacca
gcaattgaggaatactatgagatttattcagaggccgagaaatatagcaaccagatatca
gaggcaattgtccagtctccctcctctcaacaatttcttatgcctggaagagtcatggtt
gtgaaatcacaatcagcccaagatcacttgcttggtgtcattgtgaaatcaccttctgct
aatgctaaacgatacattactttagttctgacaccagaattaccatcaacttttcaaggt
cctttgactggtggtaatttgcaagataagaagtctcctgatttccagatactggtacct
aaagcaaaacgtggcttggatgatgactattattctgctgttacatctcggaaaggatcg
ggcattatcaacttaatattacctcaccgtggcattgctgctggtgtaaattacgaggtt
agggagattgataataaagacatcctatctatatgcagttgcaagataaagattgatcaa
gtggggcttttacaagatatcagcagtgctgcttattccaagactgtgcaacagctgttg
gataaaaaatctgatggaaaatacccttcagcgctggatccagtgaaagatctgaagttg
aatgacatgaatattgtagaagtttattataaatggaataacttatggccgaagatggcg
cagaataagtgtcatgggtgtgttaaattagaggagcacatcaggctagcaaaagagatg
atgaagcacaaagaggaagttaacgcattgatgtttcaaatgtcagatgaagcacttcag
cagatgccagattttcagggtcgaatagatgttctgaaggaaattgggtgtatagatgct
gacctcgttgttcagattaaaggacgtgttgcttgtgagatgaattctggggaggagttg
atatgcactgaatgcttgtttgagaaccaactggatgacctggaaccagaagaagcaatg
gcaataatgtctgcccttgtatttcagcagagaaatacttctgaaccttctcttactccc
aaattgttccaagccaaaaaaagattgtatgaaactgcaataagacttggggaacttcaa
gcgcacttcaaactacagattagccccgaggagtatgctcaagaaaatctcaagtttggt
cttgtcgaagtggtctatgaatgggcaaagggaactccgtttgcggatatctgtgagctc
actgatgttcctgaagggctgatagtcaggaccattgtcagactggacgagacatgccgg
gaattcaaaaatgcggcgtcaatcatgggtaactctgccctgtacaagaagatggaagct
gcttcgaacgcaataaagcgcgatattgttttcgctgctagcttgtacattactggttta
taa |
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