KEGG   Diospyros lotus (date-plum): 127797198
Entry
127797198         CDS       T10632                                 
Name
(RefSeq) THO complex subunit 4A-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03013  Nucleocytoplasmic transport
dlt03015  mRNA surveillance pathway
dlt03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127797198
    TREX complex
     127797198
Spliceosome [BR:dlt03041]
 Complex C
  Other components
   EJC/TREX
    127797198
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127797198
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 DUF5320
Other DBs
NCBI-GeneID: 127797198
NCBI-ProteinID: XP_052185797
LinkDB
Position
3:29473454..29478051
AA seq 251 aa
MSGSGALDMTLDDLIKSNRQSGRGGGGGFRGRGGASTGPGPARRIPIRGTNRTAPYPTAK
APESVWKHDLFTVDQAMAYSVQASGRTSSIETETKLYISNLDYGVSNEDIKELFSEVGDL
KRYSIHYDRSGRSKGTAEVVFSRRQDALSAVKRYNNVQLDGKPMKIEIVGTHIAIPRLPP
SANDSFGNVNGFPRSAQGRGGASGRGRGGRSGGRGFGRGRGRGRGRGEKISAEDLDSDLE
KYHSEAMQTDN
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtcaggctctggggctttagatatgactctggacgatctgataaagagcaatcggcaa
tccggacgcggcggcggcggcggcttcagaggccgaggtggagcctcgacgggtcccggc
cctgcccgccgcattcctatccgcggtactaaccgaactgcaccttaccctactgccaag
gctccagaatcggtttggaagcatgacttgtttacagtggatcaggcaatggcgtactca
gtgcaggcaagtggcagaacctcgtctatagaaaccgaaaccaagctctacatatcgaac
ttagattatggcgtctccaatgaggacatcaaggagctcttttcagaggttggtgacctg
aaaagatattcaatacattatgatcgaagcgggagatcaaagggaacagcagaagttgtc
ttctcacggcgtcaagatgctctatcagctgtcaagaggtacaataatgtgcagcttgat
gggaagccaatgaaaattgagattgtggggacacatattgcaatccctcgcttgcctcca
tctgcaaatgattcttttggaaatgtaaatgggtttccaagaagtgcgcaaggaaggggt
ggtgcatcaggaaggggtcgtggtggcaggagtgggggccgtggatttggacgggggcgc
ggaagaggaagaggccgtggtgagaagatatctgctgaagatcttgattcagatttggaa
aagtatcactcagaggcaatgcagacggataattga

DBGET integrated database retrieval system