Diospyros lotus (date-plum): 127797309
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Entry
127797309 CDS
T10632
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127797309
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127797309
Surveillance factors
Other surveillance factors
127797309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Pom
Alpha-mann_mid
Motif
Other DBs
NCBI-GeneID:
127797309
NCBI-ProteinID:
XP_052186064
LinkDB
All DBs
Position
3:9392994..9405615
Genome browser
AA seq
1613 aa
AA seq
DB search
MAEGKLHLPDDLLSSKPSDQSWTPKVDALGRNDDERGVMGLLDDTKDQAASESSIPLSPQ
WLYSKPSETKMEVRVPISLSLGNSADPNQKEGWRPDVPEDKKDWRRIATETDGGRRWREE
ERETSLLGRRDRRKTDRRVENTSVRDNTESRAMSTDRWHDAGNRSSAHDARRDSKWSSRW
GPEERDKESRIEKRADVEKDDTNNDGQSFVGSIPRSGPERDSDSRDKWRPRHRMEGNSSG
PGSYRAAPGFGSERGRAEGPFTGFTLGRGRSSVAVVRPPSVGSLGVTQFDRTESVPGKLC
SLTDTFCYPRGKLLDIYRKKKVDPSFAVMPEQMEEIPPITQVTALEPLAFVSPDTDEEAI
IGDLWKGKITSSGVVYSPFRKGRSTDNVTDVRDLELTNGKLGVLSSYISDEIVDASGGVV
NDNTRQADIYSILNKGDAKMSSADGGDANCEAEGEVDAAAIGMNADELVPATSNNNSFYD
VNASQLKVADATFIKHASLKDVVSAAAFGLTTKLLDDSNSLFVSPSTGQGWSGNVQHLHG
SHSEYQLGGSILPEELSLYYQDPQGEIQGPFLGADIISWFEQGFFGTDLPVRLADAPEGT
PYQELGDLMPHLKFIDGHANNTDISSKVEEPVALDEKSGPKVEDHHWSLNRFDGLPMQHV
QSRISEHEGPLQLPYTNGQNFHDLFAQDEEIVFPGRPGSGSSSIGNTSASISDISANPIG
NPSVRLEFKEPGILDQSDKKLHPFGLLFSELEGTYSRHGQSSNVPSSSGDQDQLVNPITG
RVYSFGALNDSTHDAEAWSDVYRRNTVPGPSLYQGAMDPRRLPHMDQESIHFDVPEEKLL
AQHVQLLQRKLSSRHSHLNESVLEQVPSQNSMHHRLTNQAGPDLEHLLALQLQQQQQQQQ
QRQLQLQHQLQQQQHLHQQQLLLQEQQQSQAQQMVLEQILQNQMHDSVPGQSRIDTVRTN
NVLNQVLLEQQLLHELQQRAPPPSQADASLEHLIQAKFGQTLHQGHQQDLLGLVSLSNQG
QMRSLEHQVLPQGQLHPRQLPLGLRPRVEMDEGRRIGSIWPVEETNQFLRPPPGALRAHS
VGLSPLDYYQQQQRPSLEEQLSHLERGLSIHDRFQRGLYDSGLIPFEQSMSLPVGAPHPD
VMNALVHGHGLDMQEPRARIHSASQVGGFSDLHSQHPIIPNQFRAPHPDVIEGHWSENNR
DSQLQREWAESQIRQMHLNTELQNRELEVKMSSKDSSSWMSSGTNNDGSKRFLMEFLHQN
SGHQPTDSLNMSTGLSYDRRLPSGRFSATSTSNQPFSLLSDREAGKNSLGPYGSNSGGVT
NEKASVLESSDRLPLRSNSGVPSERDRLFSVINDNPQAIYANSHMIAKPPTERDLFDMDG
KMQGFKGEVSMFKGAALDIQESMAEKAGLNHGEMSIHASSRHNSLGIDGGNSTFHNDQVD
IDYFTEEVAKDQVPAHASKGLESFLLKRPVVSRTSSSQEQLFEASDPVVRGKTPPTSLTG
EGGRREQGGYLANQKPDIVASGKKDVHFRRSSSCSDTDVSEPLFVDMLKSNAKKSAAQAE
NPAVGASESSDGTQAGRSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcaagctccaccttcccgacgatctcctttcatccaaaccgtctgatcag
tcatggacccccaaagtggatgctttaggaaggaatgatgatgaaaggggggtgatgggg
ctgcttgatgatacaaaagatcaagcagcatcagaaagcagcattcctttgtctcctcag
tggctttattccaaacctagtgagacaaagatggaagtgcgtgtaccaatttccctttct
cttggaaattctgctgatcctaatcagaaggagggctggcgtccagatgttcctgaggac
aaaaaggattggagaagaattgcaactgagactgatggtggacgccgctggcgtgaagaa
gaaagggaaaccagcttgcttggcagaagagatcgcaggaagactgatcgccgtgttgag
aacacttcggttagagacaacactgaaagtagagctatgtctactgataggtggcatgat
gctggtaatcggagttctgcacatgatgccaggcgtgatagcaagtggtcatctaggtgg
ggtcctgaagaaagggataaggaatctcggattgagaaaagggcagatgttgagaaggat
gatactaacaatgatggccaatcatttgtaggaagcatccccagatctggtcccgagcgt
gattcagattctcgtgacaagtggaggccacgccataggatggagggaaattctagtggg
ccaggttcataccgcgctgcacctgggtttggatctgagaggggaagggcagaggggcct
tttacagggtttactttaggacggggaagatcgagtgttgcagttgtaagacctccatct
gtgggttctctcggtgttactcaatttgacaggacagagagtgtccctgggaaactatgc
tcattgactgatacattttgctacccaagggggaaacttcttgatatttatcggaagaaa
aaagttgatccatcttttgctgtgatgcctgaacagatggaggaaatacctcctataaca
caagttactgcacttgaaccattggcttttgtcagccctgacaccgatgaagaggctatc
attggtgatttgtggaagggaaaaataactagtagtggggtagtgtacagtccatttaga
aagggcagatcaactgataatgtcacagatgtcagagacttggaacttaccaatggaaaa
ctgggtgttttgtcttcatatatatctgatgagattgttgatgcctctggtggagttgta
aatgataatactcggcaggctgatatttacagcatcttgaacaagggtgatgctaaaatg
agttcagcagatggaggagatgctaattgtgaagcagaaggtgaagttgatgcagctgct
attgggatgaatgcagatgaactggtgccagcaacttcaaacaataacagtttttatgat
gtaaatgcatctcagcttaaagttgcagatgctaccttcatcaagcatgcttctttgaag
gatgttgtctctgctgctgcttttggactcactaccaagctcctggatgattcaaattct
ctatttgtttctccatctactgggcagggttggagtggcaatgtacagcacctccatgga
agccacagtgaatatcaattaggaggtagtatactgcctgaggagttgagcttatactat
caggatcctcaaggagaaatccaaggaccatttcttggtgctgacatcatttcatggttt
gagcaaggctttttcgggactgatctaccagtccgcttggcagatgctccagagggaaca
ccttaccaagagttgggtgacctcatgccgcatctgaagtttatagatggacatgccaat
aatactgatataagttctaaggtagaagagcctgtagctttggatgagaaatctggtcct
aaggtagaagatcaccactggagtttaaataggtttgacggtctaccgatgcagcatgtt
cagtcgagaatttctgagcatgaaggtccgttacaacttccatatacgaatggacaaaac
tttcatgatttgtttgctcaagatgaagagattgtatttcctgggagacctggaagtggt
agcagttctatagggaatacatctgcaagcataagtgatatttctgcgaatcctataggg
aatccttctgtacgacttgaatttaaggaacctggtattctggatcagagtgacaaaaaa
ttgcatccttttgggttgttgttttctgaacttgaaggcacttactcaaggcatggccag
tcatcgaacgtaccttctagcagtggtgatcaggatcaacttgtcaaccctattacagga
agagtttactcttttggcgcacttaatgattcgactcatgatgcagaagcatggtctgat
gtttaccgaagaaatacagttcctggtccgagcttgtatcaaggtgccatggatcctcgt
cggttgccacatatggatcaagaatccatccattttgatgtcccagaggagaaacttttg
gcacaacatgttcaactactccagcgtaagctgtcatctcgccattcccatttgaatgag
tcagtgttggaacaggtgccaagtcagaattctatgcaccaccgtctgactaatcaggca
gggccggacctggaacaccttctggcactacagctgcagcagcagcagcagcagcagcaa
caacgacaacttcagcttcaacatcagttgcagcaacagcagcatttgcatcagcagcaa
ttgctattgcaagagcaacagcagtctcaagctcaacagatggttcttgagcaaatactg
caaaatcaaatgcatgattctgtccccggacagtctcgcattgatactgttagaaccaat
aatgttctcaatcaggttttgctggagcagcaacttttacatgaactacaacagcgtgct
cctcctccaagtcaggctgatgcatcacttgagcatcttattcaggcaaaatttggtcaa
acattgcatcaagggcatcaacaggatctattgggacttgtgtcactgtcaaatcaaggg
cagatgcgatccctggaacatcaggttcttccacaagggcagttgcacccaaggcagttg
cctctagggttgagaccgcgtgtggagatggatgaagggaggcgtattggttctatctgg
cctgttgaggaaaccaatcagttcctcagacctcctcctggtgcacttcgagctcactct
gtggggcttagcccattagattattatcagcaacaacagagaccatctctggaagagcag
ctgagccaccttgagcgaggtctttctatacatgatcggttccagcgaggcctttatgat
tctggcttaattccatttgagcaatcaatgtctttacctgttggtgccccacatcctgat
gtaatgaatgctttggtacatggtcatggtctagatatgcaagaaccaagggcacgaatc
cattctgcttctcaagtgggtggattctctgatcttcactcgcagcaccctataattcct
aaccaatttcgtgccccacatcctgatgtaatcgagggccactggtctgaaaacaataga
gatagtcagctacagagagaatgggcggaatctcagatacgacaaatgcatcttaatact
gagctacaaaatagggagctagaagttaaaatgtcttctaaagattcaagttcttggatg
tcttctggaacaaacaatgatggctcaaagcgtttcctgatggaatttctccaccaaaat
tctggtcaccagccaactgattctttaaatatgagtactgggttatcatatgatagaagg
ctgccttctggtcgcttttctgcaacaagtacttctaatcaaccctttagtcttttatca
gatcgagaagcaggtaaaaactcacttggaccttatggctctaattctggtggtgtaacc
aatgagaaggccagtgttttggaaagcagtgatagactacctcttagatccaactccgga
gtgcctagtgaacgagaccgacttttttcagtcatcaatgacaacccacaagcaatttat
gcaaactctcacatgattgctaaaccccccacagaaagagacttatttgacatggatggt
aaaatgcaaggattcaaaggtgaagttagtatgtttaagggggcagctttggatattcaa
gaaagcatggctgagaaggcaggattgaaccatggagaaatgtctattcatgccagtagc
aggcataattcacttggcattgatgggggtaattcaaccttccacaatgatcaagttgat
attgattatttcacagaagaggttgctaaggaccaggttccagcccatgcatccaaaggc
ctggagagttttttgctgaaacgtccagtggtctcacggacttcctcatcccaggagcag
ttgtttgaggcatctgatccagttgtcagaggcaaaactcctccaacttcacttacaggt
gaaggtggaagacgggagcaagggggatatctggcaaatcagaaacctgacatcgtagcg
tctggcaagaaagatgttcattttcgacggagctcatcttgcagcgataccgatgtgtca
gaaccgttgttcgttgacatgcttaaaagcaatgctaagaagtcagctgcacaggcagag
aatccggcagtgggagcctcggagtcatctgatggaacacaggcaggccgaagtgggaaa
aagaaagggaagaaagggaggcaaattgacccagcccttctaggattcaaggtaacaagc
aaccgcatcatgatgggtgagatacagcgtatagaagattag
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integrated database retrieval system
