Diospyros lotus (date-plum): 127797339
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Entry
127797339 CDS
T10632
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127797339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127797339
Spliceosome [BR:
dlt03041
]
Complex A
Other components
Complex A specific factors
127797339
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
127797339
NCBI-ProteinID:
XP_052186126
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All DBs
Position
1:6070465..6148065
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AA seq
872 aa
AA seq
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MSTKIDHTSAVEPHHTQTTVTAKASATPTSSPKISMFAAKSGFVIPKNKLSGSLIPIYRG
GKKPGGSDEVNDESIKQGQRKTKWGPDLTQDTAVRKGRAVAYQIRIDQITKELSPRILEK
EDNEDLQLAGTIEHHRNNSENSEFLELERREAIGEIMKLNPSYKPPADYKPLLKEAKVLV
PIKDYPGYNFIGLIFGPSNATQKRLEKETGARIQVYGTKADKGEKSEIMPSDGNEAHYEE
LYVRISADTYEKVDAAVALIELLVTPVSVNPTVVSTTSTPVSGDNANVVDQSQGMATPYL
IPPAGANQEVVRSNMQSSQNQPQIQFQSYHPGSWFPPGTSQSSLRPPSGFTFLPNSSSAP
VPINPALASSNIPSLFGPGPVQPSGLGSVLRNQPLFLSRSQLPVLQRPFMPQGSIGHAGT
PINPSMPAAIQPSPAQPSISAPPPFTGNQPMVARPPPVVRPLGPSPSQAVSRPTTSGLLP
PDRPLTPAAGSSTQSQAVAATTLSLGLGNITTPPIAPRGPQPIIIASGTPPPNISSMNMV
SPVSYSSRPEPLNHSIVTPAFTFGPQPQTRPPPQASSVVPNPVAAPTSAPRPLPIQSSSP
VPPPMQPLTPRALSPNPSPNPLFGSMPIAARPPPLQAGILGSVSATTSSFTVIQSLPTLT
APKQLSHPNSGDFTFQPHRPQNLASQAVVPRPDPMAQPPLAPSFQPAMHGSSSPTLVQQG
FPRPPPQHLSNQMNQTHSQISPFARNPTTFPTTSAPPRHPHVPQMVGPPRNASPGPHTAS
GGPFPPPPPHSRPGSSLRQQNYPPPAAGGWRMLGPNQHARAVSSNPGEQQQIYDPFSPTS
ASIPPLPLPARTRKQENNDPEYEDLMASVGVK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaagattgatcatacgtctgcagttgaacctcaccatactcagaccactgta
acagctaaagcatctgcaacgccaacaagcagtccaaagatatccatgtttgctgcaaaa
tcaggatttgttatacctaaaaacaaattgtctggttcattgattcccatctaccggggt
ggtaaaaaaccgggaggcagtgatgaggtgaatgatgaaagtattaaacaggggcagagg
aaaacaaaatggggccctgacttgacacaggataccgctgttagaaaaggaagagctgtg
gcttatcagattcggatagatcaaattactaaagagctaagtccgagaattctggagaag
gaagacaatgaagacttgcaattggcaggcacaatagaacatcatcggaataatagtgag
aattcagaatttttggaacttgaaaggcgggaagctattggtgaaataatgaagttaaat
ccaagctacaagcctcctgcagattataaacccttgttgaaggaggctaaagttcttgtc
ccaatcaaagattaccctgggtacaatttcattggtctaatatttggcccttcaaatgct
acacaaaaacgattggagaaggaaacaggagctagaattcaagtttatggtaccaaagca
gataagggagagaagagtgaaattatgccatcagatggaaatgaagcccattacgaggag
ttatatgttcggatatctgccgacacttatgagaaagttgatgctgctgttgccttaata
gaactgcttgtgaccccagtttcagtgaaccctaccgttgtctccacaacttcaactcca
gtttctggtgataatgcgaatgttgttgatcagagtcaaggtatggcaactccttatcta
attcccccggctggggcaaaccaggaagtggtacggtctaacatgcaatcttcccaaaat
caacctcaaattcagtttcagtcataccacccaggttcgtggttcccaccagggacatct
cagagttctttacgcccaccttctggattcacttttcttccaaattcgtcttcagcacca
gtacccataaatcctgccctagcatcatcaaacattccttctctttttggtcctggacca
gttcaaccatcagggcttgggtcagttctccggaaccagcctctttttctttccagatca
cagctgccagttttgcagcgccctttcatgcctcagggatccattggtcatgctggcaca
ccaataaatccttccatgccagcagcaatacagccatcacctgcacaacccagtatttca
gctccacctccttttacaggtaaccaacctatggtagcacggcctcccccagttgtaagg
ccattagggccgtcaccatctcaagctgtgtctagacctaccacttcaggattgctgcct
cctgataggccgttgacccctgctgctgggagctctactcagtcacaagcagtggcagcc
actaccctatctctaggtctgggcaacatcacaacaccccccatagctcctcgaggacca
cagcccattattattgcatctggaactccgccaccaaacatttcgtcaatgaatatggtt
tcaccagtaagctattcatccaggcctgagcctttaaatcattctattgtgactccagct
ttcacttttggcccacagcctcaaacaagacctcccccccaagcatcatctgtagttcca
aacccagtagcagcacctacctctgcaccaaggccgctgcccatccaatcttcatcacct
gtaccaccaccaatgcaaccgttaacaccaagggctctttcacctaatccatccccaaat
cctttatttggatccatgccaattgctgcacgaccaccacctttacaagcaggaatttta
ggttctgtttcagcaactacgtcaagttttactgtcatacaatctcttcccactcttact
gctccaaagcagctatcgcatccgaactcgggtgattttacttttcagcctcaccggccc
cagaatttagcctcccaagcagttgttccaaggccagatccaatggcacaaccgcctctg
gcaccatctttccagccagctatgcatggatcatcttcaccaactctggtgcagcaaggc
ttcccaagaccaccaccacagcaccttagcaaccagatgaatcaaactcacagccaaata
tcgccctttgccaggaacccaacaactttccctactacttcagctccaccaaggcatcct
catgtccctcaaatggtgggaccaccaaggaacgcgagtcccggtcctcatacagcaagt
ggtggtccttttccaccgccaccaccacatagtaggccaggaagttctctgcggcagcaa
aattatcctcctcctgcagcagggggctggcgtatgttaggtccaaatcaacatgctagg
gcagtttcttccaaccctggagagcaacaacaaatctatgacccgttctcgcccacttct
gcttccatcccacctcttcctcttccagcaaggacgaggaagcaggagaacaacgatcca
gaatacgaggacttgatggcgtcagttggagtaaaataa
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