Diospyros lotus (date-plum): 127797387
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Entry
127797387 CDS
T10632
Name
(RefSeq) endoribonuclease Dicer homolog 2-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dlt Diospyros lotus (date-plum)
Brite
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127797387
microRNA pathway
RISC loading complex
127797387
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GFIT
Other DBs
NCBI-GeneID:
127797387
NCBI-ProteinID:
XP_052186203
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Position
3:34677037..34768995
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AA seq
1413 aa
AA seq
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MEEVELATGGSQEILPDALPFARSYQMEALAKAIKQNTIVYLETGSGKTLIAIMLLRSYA
YHLRKPSPYIGVFLVPTVVLVAQQAEAVAMHTDLKVGKHWGDIGVDYWDDRIWKQQLDNY
EVFVMTPTILLNALRHRFLTLDMIKVLIFDECHNARGRHPYACIMMEFYHRQLQYNNSKL
PRIFGMTASPVKAKGSSWASTYRNQILELENLMNSKVYTTVDENVLAEYIPFSTPKLKFY
DSWDIPYALFECLSNDLKNLKEKHESALRESNMEKSAADSARGRLSKLVSTFLFCLTELG
VWLALKATESLSCYGTHICLLEKLDVHGESIVRDFSLDVFKVFSAYIPSGQGWSIGDDLN
ADKVAGYLSSKVVSLIESLLDYRDLKDLRCIVFVERVITAVVLQILLSELLPKLTGWKTK
FIAGNHSGLQLQSRNIQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSTTVC
SFIQSRGRARMPNSDFLLMVRSGDNATLNQMKNYLASGDIMREESLRHSHLPCEPLDSEL
LNEAFYCVKSTGAVVTLSSSVALLHFYCSRLPSDGFVQGFVFHGLKYFKPSPLCEIDKNS
QLCTLTFPKGCNLQPVSVKGNVKTLKQLACLEACKQLHLSGALTDNLVPDIVVEEADAQE
LGCEPYVDDQANYFPPELVGHHENNSTRLFHCYLIEMQRNFEYNVPLHHIVLGVMTKLEI
DDEKIAFDLEVDKGNLSVWANYVGVMSLSSEEVLLCQTFQISLFRVLFDHNLTKLAEVLS
AFNSRKDYSIDYLLLPCSGPSQNPLIVDWKCVSSVIFPYEKLRDHNTSCCPPKSYGRLVH
AKNDLVCSCMFENSLVYTPHNGYIYCISGTSDNLDGNSLLRERSGEAITYKQYYKSRHGI
DLCFERESLLIGKHIFPVQNCLKRRRQLKEIGQSNTFVELPPELCVIIMSPISIGTIYSF
SFLPSIMHRIEFLLIANNLKKMHLDHCMQSVIIPTAKVLEAITTKKCQEKFHLESLETLG
DSFLKYAASQQLFKTYQNQHEGLLSVKKDKIVCNAALCKRGCDHKLPGFIQNEPFDPQMW
IIPGDRSGQYKLDEEYLSATRKVFNRGRKKVKSKTVADVVEALIGAFLSTGGEKAALSFM
DWLGIKVDFANVPYVRQFSIEPKRHVNIKYLESLLNFSFLDSSLLVEALTHGSYMLPEIP
RSYQRLEFLGDSVLDYLITMHLYQKYPGMSPGLLTDLRSASVNNDCFARSAVKAGLHKHI
LYSSQELHKRIAETVHNFEQLSLATTSGCESETAFPKVLGDVIESLAGAILVDSGYNTDA
VFQSIRPLLEPLVTPETLKLNPIRELIELCQREHFVMEKTVVSRERNLIAITIEVQANGV
VHKHTSTAPVKKTAQKLASKAVLKSLKERESLS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgaattggcaaccggtggaagtcaagaaatattgcccgatgcattgcct
tttgctagaagttaccaaatggaagcactggcaaaagctatcaagcagaacacgattgtg
tacttggaaaccggctctggcaagacattgatagccataatgcttcttcgcagctatgcg
taccatctgcgaaagccttcaccctatattggggttttcttggtgcctactgttgttttg
gtcgcccagcaagctgaagctgtggcaatgcacactgacctgaaagtgggcaagcattgg
ggagatataggagtggactattgggatgacagaatttggaaacaacaactggacaattat
gaggtgtttgtaatgacacccacgatcttgctgaatgctttgaggcataggtttttgaca
ttagacatgataaaggttctcatttttgatgaatgccataatgctagaggaagacacccg
tatgcttgcattatgatggagttctatcaccgtcagttacaatataataattccaagcta
cctaggatatttggaatgactgcttcccctgtaaaggcaaaagggtcaagctgggcatct
acctaccggaatcagattcttgagcttgagaatcttatgaactcaaaggtttatacaact
gttgatgaaaatgtgttggctgaatacattcctttttcaactccaaagctgaagttctac
gattcctgggatatcccttatgcattatttgaatgtttatcaaatgatttgaagaattta
aaggagaagcatgagtctgccctacgagaatcaaacatggaaaagtctgcagcagattct
gctaggggaagattatcaaagctggtctcaacctttttgttttgtttgactgagctgggt
gtttggttggctctgaaggctacagaatctttgtcatgttatggaactcacatctgcttg
ttggagaaactggatgtgcatggtgagagcattgttagggattttagcttggatgtattt
aaggttttctctgcttatataccatccggtcaagggtggtctattggtgatgacttaaat
gctgataaggttgctggatatctatcttcaaaagtcgtctccctcattgaatctcttctt
gattacagggatttgaaggatctacgatgtatagtttttgtagaaagggttattacagct
gttgttcttcaaattctgttgagtgaattgctgccaaaactgactggctggaagacgaaa
tttattgcgggaaatcactctggtttgcagttgcagagtagaaatatacaaaacgaaatt
gttgaagagtttcgtaagggcatggtgaacatcattgttgcaacttctattcttgaagag
ggtttggatgtccaaagctgcaatcttgttattagatttgatccttcaactacagtttgc
agttttattcagtctcgaggtcgtgcccgaatgccgaactctgattttttgttgatggtg
aggagtggggataatgctacacttaatcaaatgaagaactatcttgccagtggagacatc
atgagggaggaatcactgcgccattctcaccttccctgtgaacctcttgacagtgaattg
ttaaatgaggctttttattgtgtcaaaagtacaggagcagtggtaactctgagttctagt
gtggccttgctgcatttctattgttcgcggctaccttctgatgggtttgttcaaggcttt
gttttccatggtttaaagtattttaaaccctctcctttgtgtgaaatagataagaattca
caactttgcacattgacattccctaaaggttgcaacttacaacctgttagtgtgaaaggc
aatgtcaaaactctgaagcaacttgcatgcttagaggcatgcaaacaacttcatctgagt
ggtgcattaactgataatttagtgccagatattgttgtggaagaagctgatgcacaggaa
ttgggttgtgaaccatatgttgatgatcaagctaactacttcccgcctgagttggttggt
catcacgaaaacaattctacaaggttattccattgctacttgattgagatgcaaaggaac
tttgagtataatgtcccacttcatcatattgtactcggtgtcatgactaagcttgagatt
gatgatgaaaagattgcttttgatttggaagtggataagggcaacttgtctgtgtgggca
aactatgttggagtaatgagccttagttctgaagaggtgcttctgtgccaaacatttcag
atctctcttttcagagttctatttgatcacaatttgactaagttggcagaggttctgagt
gcatttaattcaaggaaagattattcaattgactatctcttgctcccctgtagtggccca
tctcaaaatccattgattgtcgattggaaatgcgttagttctgtgatttttccttatgaa
aaactcagggatcataatacaagttgttgccctcccaagagttatggccgccttgtgcat
gctaagaatgatttggtgtgcagctgcatgtttgaaaattccttggtatacacacctcat
aatggttatatttattgtatctctggaacttcagataatttggatgggaactcgctgctg
agggaaaggagtggagaagccattacttacaaacaatattataaatcgcggcacggaatt
gacctgtgctttgaaagggaatcactgctcatagggaaacatatatttcctgtgcaaaat
tgccttaagaggcgcagacaactcaaagagataggacaaagtaacacatttgttgaattg
cctcctgagctttgtgtcatcatcatgtctcctatatccattggcaccatatattctttc
tcattccttccatctatcatgcatcggatcgagtttttgcttattgccaacaacttgaaa
aagatgcacttggatcactgcatgcaaagtgttataattccaactgccaaggtcttggaa
gcaattacaacaaaaaagtgccaagagaaatttcatcttgaatcactggagaccttgggg
gactctttccttaagtatgctgccagtcaacagctatttaaaacttaccaaaaccaacat
gagggactgcttagtgttaagaaagataaaatcgtttgtaatgctgcactgtgcaagcgt
ggatgtgaccacaaacttccgggcttcattcaaaacgaaccttttgatccacaaatgtgg
attattcctggtgatagatctggacaatataaattagatgaagaatatctttctgcaaca
aggaaagtttttaatcggggaaggaagaaagtaaaaagtaaaacagtagctgatgttgtg
gaggcacttattggtgcattccttagcacaggtggcgagaaggcagccttgtcatttatg
gattggctgggtataaaggtggattttgccaatgtaccgtatgtgaggcaattttcaatt
gaacccaagaggcatgttaacatcaaatatctagaatccttattgaacttctcattcctt
gattcttctttgcttgttgaagcgttaacccatggttcttacatgctaccggagattcca
agatcttatcagcgcctagagttccttggagattcagtgttggattaccttataaccatg
catctgtatcagaaatatcctggaatgtcacctgggctgttgactgatttaagatcagct
tctgtaaacaatgactgttttgctcgatctgcagtcaaggctggattacacaaacacatt
ctttattcctcacaagagctccacaaacgtatagctgagactgttcataattttgagcag
ttatctttggcaacaacttctggatgtgaatctgaaacagctttcccaaaggtgcttgga
gatgttatagaatccctagcaggggctattcttgttgattcaggatacaacacagatgct
gtcttccagagcataaggcctcttctggagcctttggttacacccgaaacattgaaactg
aatccaattagggagctgattgaattatgtcaaagggaacatttcgtcatggaaaagact
gtggtttctcgcgaaagaaatttgatagcaattacaatagaggttcaagcaaatggtgtc
gtacacaagcatactagcaccgcgccggttaagaagacggcccaaaaactggcttccaaa
gctgtgctcaagtccttgaaggaaagggaaagcttatcttga
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