Diospyros lotus (date-plum): 127798154
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Entry
127798154 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127798154
03041 Spliceosome [BR:
dlt03041
]
127798154
03036 Chromosome and associated proteins [BR:
dlt03036
]
127798154
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127798154
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127798154
mRNA cycle factors
Common to processing body (P body) and stress granule
127798154
Spliceosome [BR:
dlt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127798154
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127798154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127798154
NCBI-ProteinID:
XP_052187463
LinkDB
All DBs
Position
3:complement(33361320..33378517)
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AA seq
612 aa
AA seq
DB search
MRTSWADSVAAAEKAAAGSSANNGAVASGSAPSRSTYVPPHLRNRTPSLDPPAPAYGGST
SGTDQSAQGGPPGGSRWGAPPRNDYGRSGYMGGGRGGGWSSRSGGWDSRGREREVNPFGD
DGNTDQELVEQENSGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEELNQNIRRCKYSK
PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQFAQRRPRGRVAFPLAL
ILSPTRELSMQIHEEARKFAYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDL
LERARVSLEMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQ
RLASDFLASYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRENDVQSKQALT
LVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREMALKSFKSGRTPILVATDVAARG
LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNASLARSLADLMQESN
QEVPAWLSRYAARSSYGGGKNRRSGGRFGGRDFRRDSSFNRGGSDYYGGGSGYGASGGYS
GGYGPGVTSAWD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgtcatgggctgattcggttgctgcagctgagaaagctgcggctggttcttct
gcaaataacggggccgttgcttctggttccgctccttctcgatccacatacgtgcctccc
catctccggaatcggacgccttctttggaccctccggctcctgcgtacggtggctcaact
tctgggacagatcaatctgctcaaggtggtcccccaggtggtagtcgttggggtgctcca
ccaaggaatgattatggtcgttctggatatatgggtgggggtcgcggtggtggttggagc
agcagaagtggtggctgggatagtagggggagggagcgggaagttaacccctttggggat
gatggcaatacagaccaagagcttgttgaacaggaaaattctggaatcaattttgatgca
tatgaagatattccggtggaaactagtggggataatgtgccgcctcccgtgaatacgttt
gcagagattgatctgggtgaagaactcaatcaaaacatcaggagatgcaagtattcaaag
ccaacacctgtccagcgacatgccataccaatttccttggcaggtcgggatttgatggcc
tgcgcccagactgggtctggcaagacagctgctttctgcttcccaattataagtggaatt
atgaaggggcagtttgcacagagacggcctcgtggtcgtgtagctttcccacttgccctt
atcctttctccaacaagggagctctcaatgcaaattcatgaagaggctaggaaatttgca
tatcaaactggtgtaagggtggttgttgcctatggtggagcccctatcaatcaacagctt
cgagacctggaaagaggtgttgatatactggtggcaactcctggacgattggtagattta
ctcgagagggctagagtttcactagagatgataaagtacttagccctagatgaggcagat
cgaatgctggatatgggttttgaacctcaaataaggaaaatagtggaacaaatggacatg
cctccaccaggtgttagacagaccatgttgttcagtgccacttttccaaaagagatacag
agattggcatctgattttcttgcaagctatatttttctggctgttggaagagttggttcc
agtacagatctgattgtacaaagagtggaatttgttcatgagtctgataagagaagccac
ctcatggacctacttcatgcacagagggaaaatgatgttcaaagcaagcaagctttaact
ctggtgtttgtggagacaaagaaaggagctgattctcttgaacattggttatgcatgaat
ggttttcctgctactactattcatggtgatagaacacagcaggaaagagaaatggctttg
aaatccttcaaaagtggtagaaccccaattttggtcgcaacagatgtggcggcacgtggt
cttgatatccctcatgttgcacatgtcgtcaactttgatcttccaaatgacattgatgat
tacgtccatcgaatagggcggactgggcgagctggtaagtctgggttggcaactgcattc
tttaacgagaacaatgcttctttggcaaggtcattagctgatctaatgcaagaatcaaat
caagaagtacccgcttggctttcccgctatgctgctcggtcttcctatggtggagggaag
aatcgtcgttctggaggacggtttggtggtcgtgacttccgaagggactcctctttcaat
aggggcggttcagattactatggtggaggttctggatatggagcttctggtggttacagt
ggaggatatggtcccggggtgaccagtgcatgggactaa
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