KEGG   Diospyros lotus (date-plum): 127798189
Entry
127798189         CDS       T10632                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03020  RNA polymerase
dlt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127798189
  09124 Replication and repair
   03420 Nucleotide excision repair
    127798189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dlt03021]
    127798189
   03019 Messenger RNA biogenesis [BR:dlt03019]
    127798189
   03400 DNA repair and recombination proteins [BR:dlt03400]
    127798189
Transcription machinery [BR:dlt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127798189
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127798189
DNA repair and recombination proteins [BR:dlt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127798189
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 127798189
NCBI-ProteinID: XP_052187524
LinkDB
Position
3:complement(30352717..30362683)
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGANA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacatcgtattggagcggaacatgcagctccaccctcgccacttcggtcgc
gacctccgagagaagctagtctccaagctcatgaaagacgttgaaggcacctgcagtggt
cggcacgggttcgtggtggcgataaccggcattgagaacgtcgggaaggggctgattcgg
gacggtactgggttcgtgaccttcccggtgaagtaccaatgcgttgttttccggcccttc
aaaggcgagattttggaagctgtagttaccatggtcaataagatgggatttttcgctgaa
gccgggccagttcaaattttcgtgtcaaatcatttgataccagatgatatggagttccaa
tctggagatatgcctaactatacaacttcagatggatcagttaagattcaaaaggatagt
gaagttcggttaaagattattggaactcgagtagatgctacagaaattttctgcattggt
actataaaggatgatttcttaggtgtgatcagtgatccgggtgcgaatgcctga

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