Diospyros lotus (date-plum): 127798202
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Entry
127798202 CDS
T10632
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlt03016
]
127798202
Transfer RNA biogenesis [BR:
dlt03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
127798202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
PEP5_VPS11_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
127798202
NCBI-ProteinID:
XP_052187549
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Position
3:24878461..24888026
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AA seq
836 aa
AA seq
DB search
MSNGGPEVGRVFIGAGCNRIVNNVSWGACGLVAFGAQNAVAIFCPETAQILTTIPGHKAS
VTCTYWLPSAKFAFKAKHLERHFLLSGDAEGVIILWELSLLDKQWRYVLQVPQSHKKGVT
CIAGFMISETDAVFASTSSDSSVYVWELALPSSSGGDCNLSCLDTLSVGPKPMVTLSIAE
LPGTTGHFLLAMGGLDNKIHLFCGERTGKFVRACELKGHNDWIRSLDFSLPVCTNGEMSN
LLLVSSSQDRSIRIWKITPHNSLANSRRREDISLTSYIEGPIFVVGSFSYQISLESLLIG
HEDWVYSVEWQPPLVSAEGVECHQRQSILSASMDKTMMIWQPERTTGIWMNVVTVGELSH
CALGFYGGHWSSSGDAILAHGYGGSFHLWRNVGVDADNWQPQKVPSGHIAAVADIAWAKS
GEYLLSVSHDQTTRIFAPWLSEPHLETLDTWHEIARPQVHGHDINCVAIIQGKGNHRFVS
GAEEKVARVFEAPLSFLKTLNHAALHKSTFPEDMQADVQILGANMSALGLSQKPIYVQAA
HEPTVRNSNEGVDTLETIPDAVPVELTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCD
HKGELVASSCKAQSVSVAEIWLWQVGSWKAIGRLQSHSLTVTQMEFSHDDNFLLAVSRDR
HFSVFSIKQTGADKISYQLLARQEAHKRIIWACSWNPFGHEFATCSRDKTVKIWAVEKSS
SVKQLMTLPQFHNSVTAISWLGLDLSSNAGCLAVGLENGLIELWSLSVVRTEDGSLAATG
PSTAALLVRLDPFMCHVSTVHRLAWRNRVQSTASGSMQLASCGADNSVRVFEVRFD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcggcccagaggtggggagggttttcatcggagcagggtgcaaccgaata
gtgaacaacgtctcgtggggggcttgcggtttagtcgccttcggtgcccaaaacgccgtt
gccatcttctgccccgagactgcgcaaattcttaccacgattccgggtcacaaggcctcc
gtgacttgcacctattggcttccatctgctaagttcgcatttaaggcaaaacacttggag
cggcatttcttactctctggtgatgctgagggtgtcattattttgtgggagttatctctt
ctagacaaacagtggaggtatgtgttacaagtaccgcaatcacacaagaagggtgtcaca
tgcattgctggatttatgatttctgaaactgatgcagtgtttgcgtctacttcttccgac
agttcagtttatgtatgggaattggcccttccatcttcatctggcggtgactgcaatttg
tcatgtctagacaccctttctgttggtccaaagcctatggttacactttctatagcagaa
ttgcctggaactactgggcattttctcctagcaatggggggtttggataacaagatccat
cttttttgtggtgagaggacaggaaaatttgttcgcgcttgtgagttaaaagggcataat
gattggataagaagtttggatttctcattacctgtatgcacaaatggtgaaatgagtaat
cttttgttagtaagttcatctcaagacagaagcatacgcatctggaagataactccacac
aattctcttgctaattctagaaggagagaagatataagcttgacttcttatatcgaaggt
cctatatttgttgtgggttcattttcctaccagatatcattagagtctctcctcattgga
catgaggattgggtgtactcggtggaatggcaacctcctttagtttcagccgaaggagtt
gagtgtcatcaacggcaaagcattttatctgcatccatggacaagacaatgatgatctgg
caaccagagagaaccactggtatctggatgaatgtggttacagttggagagttaagtcat
tgtgctttagggttttatggtggacactggagctcaagtggagatgctattctagctcat
ggttatggtggatctttccatctctggagaaatgttggtgttgatgcagacaattggcag
ccacaaaaagttccgtctgggcacattgcagcagtggcagatattgcatgggccaagtct
ggtgaatatttgctttcagtcagtcatgatcagactacaaggatatttgctccatggctt
agtgaacctcatttggaaactctggacacttggcatgaaattgctcgccctcaagttcat
gggcatgatatcaactgtgtggcaatcattcaaggaaagggtaaccaccgttttgttagt
ggggctgaggagaaagttgcaagagtatttgaagcacctctatcttttttaaagacattg
aatcatgctgctttacacaaatctacatttcctgaagacatgcaagctgatgttcagatt
ttaggtgcaaatatgtctgctcttgggctgtcacagaaacctatttatgttcaagctgca
catgagcctacagtgagaaatagtaatgaaggtgttgataccctcgaaactataccagat
gcagttcctgttgaattaactgaacctcccattgaagaacaactggcatggcatacatta
tggcctgagtcacacaagctttacggtcatgggaatgagctgttttcactatgttgtgat
cataaaggggagcttgttgcttcatcatgtaaggcccaatctgtttcggttgcagaaata
tggctatggcaagtgggttcgtggaaggcaattggtcgcttgcagtctcatagtttaaca
gtgacacaaatggaattctctcatgatgacaattttcttttggcagtgtcaagggatcgc
cacttctctgttttctccatcaaacaaacaggtgccgacaaaatcagttaccagcttcta
gcacggcaggaggcccacaaaagaataatatgggcatgttcctggaacccatttggacat
gaatttgccacctgttcaagggacaagactgtgaagatctgggccgtggagaagagctct
tcggtaaaacagctcatgactctgccgcagttccacaatagcgtcacagccatatcctgg
ctcggccttgatctttcgagcaacgctggatgtcttgcagttggactggaaaatggactc
attgaattgtggagtctttctgttgtccgaacagaagacggcagcctagcggcgacgggg
ccttcaaccgccgctcttctcgtccggttggatccattcatgtgccatgtttcaacagtt
caccggctagcttggagaaaccgggtgcagagcacagcctctgggagcatgcagcttgct
tcttgtggagctgacaactctgtgagagtgtttgaggtgagatttgattag
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