Diospyros lotus (date-plum): 127798227
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Entry
127798227 CDS
T10632
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00740
Riboflavin metabolism
dlt00790
Folate biosynthesis
dlt01100
Metabolic pathways
dlt01110
Biosynthesis of secondary metabolites
dlt01240
Biosynthesis of cofactors
Module
dlt_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
127798227
00790 Folate biosynthesis
127798227
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
127798227
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
127798227
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
127798227
NCBI-ProteinID:
XP_052187619
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Position
3:29313702..29317406
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AA seq
538 aa
AA seq
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MDCILFQHPLFPHIFISSSFHRSFAAPQSVGVGVFRHRWLSSACWAAGEPGTGADNLFDH
SSLRGNENGFLFGDLEDSSLVPFGTLDAEITPETIDFFVSDAEGDPDCPSEGFYSIQQAL
NVLRQGKFVIIVDDESGGIEGNLVMAASLASPEAMAFMVKHGTGIVSVGMKGEDLERLKL
PLMSPEKEDDSSAPSFTITVDAKAGTSTGVSASDRAKTVRALSSPDSKPEDFRRPGHVFP
LKYRNGGVLRRAGHTEASVDLVMLAGLLPVSVLSAVIDADNGSMSSLPNLRKLALEHSIP
IVSITDLIRYRRKREKLVERTAVSRLPTKWGLFQAYCYHSKLDGTEHVAIAKGNIGNGQD
VLVRVHSECLTGDIFGSARCDCGNQLALAMQLIEQAGRGVLVYLRGHEGRGIGLGHKLRA
YNLQDQGHDTVEANLELGFAADAREYGIGAQILRDLGVRTMRLMTNNPAKFTGLKGYGLA
VVGRVPVMTPITEENRKYLETKRTKMGHVYGSDIQEPLAGFMNPNVNSADSPGGPQKS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggattgcatcttgtttcagcacccactctttccacacatctttatcagctcaagtttt
catagatcctttgcagctccccagagcgtgggagtcggggttttccggcaccggtggctg
agctccgcttgctgggcggccggtgaacctggaaccggagctgacaacctgtttgatcac
agttctctgaggggaaatgaaaatggcttcctatttggtgacttggaggactcgtctttg
gtgccatttgggacgttagatgctgagattacaccagaaacgattgatttcttcgtcagt
gatgccgagggggatcccgattgcccgtctgaaggcttctattccattcagcaggcgctt
aatgtgttgcgccaaggcaagtttgtgattattgtagatgatgaaagtgggggtattgaa
ggaaaccttgttatggcagcatctctagcaagtcctgaagctatggcgtttatggttaag
catggaactgggattgtttctgtgggcatgaaaggagaagaccttgagagattaaagctg
cccttaatgtcacctgagaaggaagatgactcgtctgctccctcttttacaatcacggtg
gatgcaaaagctggcacttccacaggggtatcagcctcggacagagcaaaaactgtccgt
gcactttcatctccagattctaaaccagaagacttcagaaggccaggacatgtatttccc
ctcaagtatcgaaatggtggggttctaagaagagctggtcatactgaggcttctgtggat
ttggtcatgctggctggcttgctgccggtttctgtcctttcagctgttattgatgctgat
aatggttctatgtcctctcttccaaacttaagaaagctggccttggaacacagcattcca
attgtttcaatcactgatttgattaggtatagaagaaaacgggaaaaactggtcgagaga
actgctgtttcacgcttgccaactaaatggggtctgtttcaggcctattgctatcactca
aagctagatggaacagagcatgtagcaattgcaaagggaaacattggaaatgggcaagat
gttctagtaagggttcattcggagtgcttgactggtgatatttttgggtcagctcggtgt
gattgtggcaatcagttagcgttagcaatgcagttaattgagcaagctggaagaggagtt
cttgtataccttcgaggtcatgaaggacgagggattggcctcggccacaaacttcgggcc
tataatttgcaggaccaaggtcatgacacggttgaagccaatttagaacttggatttgct
gctgatgcacgtgagtatgggattggcgcccagatactaagagacctaggtgtacgaacc
atgcgcctgatgaccaacaacccagccaaattcacaggtctgaagggctatggcttggct
gttgttgggcgtgttcccgtgatgactcctattactgaagaaaaccggaagtatttggaa
acaaaacgtaccaagatgggtcatgtatatggctctgacatacaagaaccattggctgga
ttcatgaatccaaatgtaaatagtgcagactcgccagggggacctcaaaagagttaa
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