Diospyros lotus (date-plum): 127798349
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Entry
127798349 CDS
T10632
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127798349
03036 Chromosome and associated proteins [BR:
dlt03036
]
127798349
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127798349
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127798349
SLIK complex
127798349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
127798349
NCBI-ProteinID:
XP_052187828
LinkDB
All DBs
Position
1:23178165..23232541
Genome browser
AA seq
1745 aa
AA seq
DB search
MAFYRNYSSGTVSQSFLDEKGHGQTIERMHGMVGNEDVEGTSSDKDSEIKMDGHYRSDGE
PDDSSRPQGSAAAGNDRTSNLQPSGRRMAQSVKWGSTFWKDCQPMEPRAGSESGHESKSG
SEFKNEEGFEEDSSDGQEERLGLEDDGGQKEGEKVHRGDVPAEEMLSDDYYEQDGDDQND
SLHYGTLNHSSGFSSKVHSRSVAANNNVARYSKEPNGEQYDDDDDADYEDDDDEDDEDDP
DDADFDPDYGARRSCKGNKQDEDWDVEDFEEDNSYGDHDDDLGISDEDDAYYKKPRGKQR
GRGGRSVKPSGEFKSFSLSSRRKKGGKASFEEEDSSTKDLENDSDEDIRSMTRRGAHLRQ
KVGGRAASSSSKSNEVRTSSRSVRKVSYAESEESEELDEGKKRKSQKEENEEEDGDSIEK
VLWHQPKGTAEEAMRNHKSTEPVLLNHLFDSEPDWNEMEFLIKWKGQSHLHCQWKPISAL
QNLSGFKKVINYTKKVMDEIRYRKTVSREEIEVNDVSKEMDLDIIKQNSQVERIIADRVK
DSSNDIGPEYLVKWQGLSYAEATWEKEVDIALAQAAIDEYKAREAAMSLQGKMVDFQRKK
SKASLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLG
FLQNAQQIYGPFLVVVPLSTLSNWAKEFKKWLPNMNVIVYVGTRASREVCQQFEFYTNKK
GGRGIKFDALLTTYEVLLKDKAVLSKIKWSYLMVDEAHRLKNSEASLYTTLSEFSTKNKL
LITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNENELANLHMELRPHILR
RVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELK
KCCNHPFLFESADHGYGGDTNITGSSKLERIILSSGKLVILDKLLVRLHETNHRVLIFSQ
MVRMLDILAEYLSHRGFQFQRLDGSTKAEVRQQAMEHFNAPGSDDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVL
DHLVIQKLNAEGRLEKKEAKKGSSFDKNELSAILRFGAEELFKEEKNDEESKKRLLSMDI
DEILERAEKVEEKAAGEEQGNELLSAFKVANFCSAEDDGSFWSRWIKPEAVAQAEEALVP
RAARNNKSYMEANPPERSNKRKKRGVEPQEKGPKRRKADSSGYSAPIIEGAAAQVRGWSY
GNLSKRDASRFCRVVKKFGNHSQIGLISAEVGGAVETAPTEAQIEIFDALIDGCRDAVDG
VNFDPKGPILDFFGVPVKANDLLNRVKELQLLANRISQYEDPISQFRALNYLKPATWSKG
CGWNQKDDAKLLLGIHYHGFGNWEKIRLDEKLGLTKKIAPVELQHHETFLPRAPNLNERA
SQLLEMELVAVGGRDANATGGRKASKKQRENLRSISVSHSKGKQGKPGPTKLNVQMSRTR
PPKPQKAEPLVKEEGEMSDTEEVYEQFKEVKWMEWCEDVMVEEEKTLRRLQKLQTTSADL
PKEKVLSKIRKYLQLLGRRIDQIVLEHEEGTHRQERMTTRLWNYVSTFSNLSGERLHQIY
SKLKLEQQEAGVGPSHLNGYPPGPVARSRGYINESSQTSLSSHRGFDTGKFEAWKRRRRA
EADMHSQGQPPHQRPMGNGFRLPDPNSSGILGSGPSDNRNYGNERPYRVRQTGFPSRHGF
SSGVK
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggctttttataggaactactcgagtggaacggtttcacagagtttcttggatgagaaa
ggacacggacagacaatagagagaatgcacggaatggtagggaatgaagatgtagaaggt
acttctagtgataaagattcagaaatcaagatggatggtcattatagaagtgatggtgag
cctgatgattctagtaggcctcaaggttctgctgctgcagggaatgatagaacatcaaat
ttacagccatctggaaggagaatggctcagagtgtaaaatggggttcaaccttttggaag
gactgtcaacctatggagcctcgcgctggctcagaatctggacacgagtcaaaaagtggg
tccgaatttaaaaatgaggaaggatttgaagaagattcgtcagatggccaagaagagagg
ttaggtttagaagatgatggtggtcagaaggaaggagagaaggttcacaggggtgatgtc
cctgctgaagagatgttgtctgatgattattatgagcaggatggagatgatcagaatgat
tctttgcattatggaacactaaaccattctagtggttttagttcaaaggttcattcacga
tctgttgcagcaaacaataatgtggctcggtattcaaaggagccaaatggggaacaatat
gatgatgatgatgatgctgattatgaagatgatgatgatgaggatgatgaagatgatccg
gatgatgctgactttgatcctgactatggtgccaggagaagctgcaagggaaacaagcag
gatgaagactgggatgtagaagattttgaagaggataacagctatggtgatcatgatgat
gatttgggtatatcagatgaagatgatgcttattataagaaacccaggggcaagcaacga
ggtaggggtggacgtagtgtgaaacctagtggagagttcaaatcattttctttgtcaagt
cgacgaaagaaaggaggtaaggcatcatttgaagaggaagattcatcaacaaaagacttg
gagaatgatagtgatgaggatatcagaagtatgactaggagaggtgctcatcttcgacaa
aaagttggcggtcgtgctgcttcttcaagtagcaaaagcaatgaagtaagaacttctagt
cggtcagtgcgaaaagtgtcatatgctgaaagtgaagaaagtgaagaacttgatgaaggc
aaaaaaagaaagagccagaaggaggagaatgaagaggaagatggtgactctatcgaaaag
gtgttgtggcatcagccaaagggcacagctgaagaagctatgaggaatcacaagtccact
gaacctgtcttattaaatcacttgtttgactctgaaccagattggaatgagatggaattt
ttaataaaatggaaaggccagtcacatctccattgtcaatggaagccgatctctgcgcta
caaaatcttagtggttttaagaaggtaataaattatacaaaaaaagtgatggatgaaata
aggtatcggaagacagtctcacgtgaagagattgaggtcaatgatgtgagcaaagaaatg
gacttggatattatcaagcaaaatagtcaggtggagagaataattgcggatagagtgaag
gatagttcaaatgatattggtcccgagtatttagtcaagtggcaaggattatcttatgct
gaagcaacttgggagaaagaagttgatattgcattggcccaggctgccattgatgagtat
aaggctcgtgaggctgctatgagtttacaaggaaaaatggtggattttcagcgtaagaag
agtaaagcaagtttaaggaagcttgatgagcagcccgaatggttaaaggggggaaagctt
agagattatcagctagaaggcttaaacttccttgttaacagttggagaaatgatacaaat
gttatattagctgatgaaatgggtcttggtaaaactgttcagtcagtttctatgcttggt
tttttacagaatgcccaacaaatttatggtccatttctcgttgttgtgccattatcaacc
ttgtcaaactgggcaaaggagtttaagaagtggcttccaaacatgaatgttattgtatat
gttggaactcgtgcaagccgtgaggtctgtcagcaatttgagttttacactaacaagaag
ggtggccgtggtataaagtttgatgctttgttgactacatatgaagtattattgaaggat
aaggcagtgctatccaaaatcaaatggagctatcttatggtggatgaagctcataggtta
aagaacagtgaagcttcattgtatacaacactttcagaatttagcaccaagaacaagttg
cttatcactggtactcccttacaaaatagcgtcgaagaactatgggctctgcttcacttt
cttgatcctgataaatttaagagtaaggatgactttgttcaaaattacaagaaccttagt
tccttcaatgagaatgagctggctaatcttcacatggaattgaggcctcacatccttcga
agagttatcaaggatgtggagaagtctttgcctcccaagattgaacgtattcttagggtt
gagatgtcccctcttcagaagcagtattataaatggatcttggaacgcaacttccatgat
ttaaacaaaggagttcgtggaaatcaggtttcactgttaaatattgtggtggaattgaag
aaatgttgcaatcatccatttttgtttgaaagtgctgatcatggttatggtggggacacc
aacattactggtagcagtaaattggagaggataatcctgagcagtgggaagctagttatc
cttgataagctgcttgtcagattgcatgaaactaatcatcgtgtgttaatattttctcag
atggttaggatgttggatatattggcagaatatttgtcacatagagggttccagtttcag
aggctagatggtagtaccaaggccgaagttcgccaacaggcaatggaacattttaatgca
cctggcagtgacgatttctgtttccttctttcaactcgtgctggtggcttaggtatcaac
ctcgcgacagcagatacagttataatatttgattcagattggaatcctcaaaatgattta
caggccatgagtagagctcatagaattgggcagcaagaagttgttaatatttaccgcttt
gttactagtaagagtgtggaggaagatatcttggaacgcgctaagaagaagatggttctt
gaccatttggtgattcaaaaattgaatgctgagggtaggttagagaagaaagaagctaaa
aagggaagttccttcgacaaaaatgagctctcggcaatcttgaggtttggggctgaagaa
ctatttaaggaggagaaaaatgatgaagaaagcaaaaagaggcttttaagtatggatatt
gatgaaattcttgaaagagctgaaaaggttgaagaaaaggcagctggagaagagcaaggg
aatgagttattgagtgcttttaaggttgccaacttctgtagtgcagaggatgatgggagc
ttctggagccgctggataaaaccagaagctgtagctcaagctgaagaagctttagttcct
cgagctgcaagaaacaataagagttatatggaggctaacccccctgagagaagtaacaaa
aggaaaaaaaggggagtagaaccccaggagaaaggcccaaagcgccgtaaagcagatagt
tctggctattcagccccaataattgaaggtgccgctgctcaagtaagggggtggtcttat
gggaatttgtcaaagagagatgcttcacgcttctgtcgagtggttaagaagtttgggaac
cacagtcagatcggcttaatatcagctgaggtaggtggggcagttgaaactgctcccact
gaagcacagattgagatttttgacgctttgattgatggatgcagagatgcagttgatgga
gtcaactttgaccctaagggacctatattagatttttttggtgtccctgtaaaggctaat
gatttactaaaccgtgttaaagaacttcaactcctagcaaatcgtattagtcagtacgag
gacccaatctcgcaattccgagctttaaattacctcaaacctgctacttggtctaaaggt
tgtggatggaatcagaaggatgatgctaaattgcttttgggaatccattaccatggattt
ggtaattgggaaaagatacggttagatgaaaagcttggtcttacaaagaaaattgctcca
gtggaacttcaacatcatgaaaccttcctacctcgggcccccaacctgaacgagcgggct
tctcaacttttggaaatggaacttgtagctgttggggggagggatgcaaatgccacgggt
ggccgcaaagcttccaagaagcagagggaaaatcttcgaagcatctcggtgtctcacagc
aaaggcaaacaagggaaaccaggtcctaccaaacttaatgtccaaatgagcaggacaaga
cctccaaaaccccagaaggctgaacctttagtaaaagaggaaggtgaaatgtcagatact
gaagaagtgtatgagcaatttaaggaagtgaaatggatggaatggtgtgaagatgtcatg
gttgaggaggaaaagacccttaggcgtcttcaaaagttgcaaactaccagtgctgattta
ccgaaggaaaaggtgctttccaaaattcggaagtatctacaacttcttggtcgaaggatt
gaccaaattgtcttagagcatgaggaggggactcatagacaagaaaggatgactacacga
ctgtggaactatgtttccaccttctcaaatttgtctggtgagagacttcatcagatttat
tcgaaactaaaactggagcagcaggaggcaggggttggaccctctcacctgaatggttat
ccgcctggacctgttgctaggtcaagaggatacataaatgagtcttctcagacatcttta
tcaagtcacagggggtttgatacagggaaatttgaagcatggaaaagacgaagaagagct
gaagctgatatgcattcccaaggtcaacctccacatcaaagacctatgggtaatggtttc
cgtcttcctgatccaaattcttctggaattctggggtcaggaccgtctgataatagaaac
tacggtaatgagaggccttatagggtgcgtcagactggttttccttctagacatggtttc
tcgtcaggcgtgaagtag
DBGET
integrated database retrieval system
