Diospyros lotus (date-plum): 127798490
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Entry
127798490 CDS
T10632
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127798490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dlt03009
]
127798490
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127798490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Vps41
Utp13
Utp12
Itfg2
Motif
Other DBs
NCBI-GeneID:
127798490
NCBI-ProteinID:
XP_052188048
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All DBs
Position
3:complement(1840554..1842475)
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AA seq
530 aa
AA seq
DB search
MAEEQQPSVGRAFPVKPKLKPPSKKSSSTPEESKYWKSFKPHPTQALISSITSLSFSPSS
PHDFAATHSATVTIFSAQTLEPKSTISGFSDTTTSASFRSDGRLLAAGSYSGVVQVFDVK
SRTSLRHLRGHSRPVHLVRYPRHDKLHLFTGGDDAVVKYWDVVSGTSYLELLGHKDYVRC
GDGSPARDDMFVTGSYDHSIRVWDVRVSSGSSVMELNHGKPVEDVVFLPSGGLIATAGAS
SVKIWDVIGGGKLLYSMESHNKTVTSICVGKIGKDSGEEAQQYRILSVSLDGYMKVFDYA
KFKITHSMRFPSPLLSVGFSPDCSTRVIGTSNGIIYAGRRKMKENVGLGLRDPGVLGPIG
EPPKRVLRPSYFRYFHRGQNEKPSEGDFLIMRPKKVKLAEHDKLLKKFRHKEALVSALRC
KNPESVVAVMEELVARKKLLRCVSNLETEELGLLLGFLARYSTMPRYAGLLMRLALKVLE
MRAEDVRNSDLLKSHIRNLKRSVEEEIRIQQSLQEIQGIISPLLRIAGRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagcagcagccgagcgtaggcagagccttccctgttaaaccaaagctcaaa
cccccatcgaagaaatccagttcaactccagaagaatccaagtactggaaatccttcaaa
ccccaccccacacaagccctaatctcctccattacctctctctctttctccccctcctct
cctcacgacttcgctgccacccactccgccactgtcaccatcttctccgcccagaccctc
gaacccaagtccaccatctccggcttctccgacaccaccacctccgcctccttccgctcc
gacggccgcctccttgccgctggctcttactcgggtgtggtccaggtcttcgacgtcaag
tcccgcacctccctccgtcacctccgcggacactcccgccccgtccaccttgtccgctac
ccccgtcacgacaagcttcacctcttcactggcggtgatgacgctgtcgtcaagtattgg
gacgtcgtgtccggaacaagctaccttgaacttcttggtcacaaagattacgttcgctgc
ggcgatggttcgccggcgagggacgacatgttcgttactggatcatacgatcattcaatt
agggtttgggatgttagggtttcgagtggtagctcagtgatggagctcaaccatggaaag
cccgtagaggacgtagttttcttgccgtccggagggttaattgcaacggctggtgcgagt
tctgtgaagatttgggatgtgattggtggcgggaagttactgtattcaatggagagtcac
aacaagacggtgacttcgatttgcgtcgggaagatcggcaaggacagtggcgaggaggct
cagcagtatcgcattttaagtgtttctttggatgggtatatgaaagttttcgattatgca
aagttcaaaattactcattccatgcggtttccttccccgcttttatcggttggattctct
cctgattgctccacgagagttatcggtacttcaaatgggattatatatgctggaagaagg
aaaatgaaggagaatgttggattggggctgagggaccctggagtattgggtcctattggg
gaacctccgaaacgggtcttgaggccctcgtattttagatactttcatcgaggccaaaat
gaaaagccttcggagggggatttcttgataatgaggccaaagaaggtgaaattggctgag
catgacaagctgttgaagaagtttaggcataaggaagctttggtctcggcattaaggtgc
aagaatccggagagtgtggtggctgttatggaggaattggtggcaaggaagaagttgttg
agatgtgtttcgaatttagagacagaggaacttggtttgttgttgggatttttggcgagg
tactcaacaatgccaagatatgcaggcttgttgatgaggttggctctgaaagttcttgaa
atgcgggctgaagatgttaggaattctgatttattaaagagccatattagaaacctgaag
agatcggttgaagaggagataaggatacaacagtcattgcaggagatacagggcataatt
tctcccttactgaggattgctgggagaagatag
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