Diospyros lotus (date-plum): 127798503
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Entry
127798503 CDS
T10632
Name
(RefSeq) vacuolar sorting protein 3
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127798503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127798503
Membrane trafficking [BR:
dlt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127798503
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
TPR_Vps41
CNH
Motif
Other DBs
NCBI-GeneID:
127798503
NCBI-ProteinID:
XP_052188074
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All DBs
Position
1:complement(16398800..16449807)
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AA seq
1006 aa
AA seq
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MAKLEHSTRTVLELLSDFSPSTSSFFPLSSSIRSLAISTSSDSQTLIYAGTTSGGVLLLS
VNFDTRTVSFLRHASVSESAVDYLLVIDHAGHVVVFSGGFLFLVDSLFLGPVRKIGGLKG
ISVIARRVRSGASECSDLVVRDDGGGSSSSEFLSARRMLLKLGGGGGGGGIRSNGWKAKE
SELRSNDGNSVFSIVIGRRLILVELVFGSRSGRNDGHGDGNGGSFVILKEIQCVDGVKTM
VWLDDSIVVGSLSGYILYSCVTGQGSLIFSLPDPSSPPRLKLLMEEYKMLLLVDNVGISV
NARGQPVGGSLVFHRAPDSVGEIASCIAVVKNGKMELYHKRSGNRIQLVSFAEEGVGPCV
VTDQDGRGQLIVVATPSKVICYRKVSSEEQIKYLLRKKNFKEAITLVEELQSEGEMTKEM
LSFVHAQVGFLLLFDLRFEEAVNHFLLSETMQPSEIFPFIMRDPNRWTLLVPRNRYWGLH
PPPVPLETVVDDGLMAIQRDIFLKKAGVETAVDDDFLLNPPNRADLLESGIKNIIRYLHI
SREKHLDPSVKEGVDTLLMYLYRALNCVEDMEKLASSENSCVVEELETLLNDSGHLRTLA
FLYASKGMSSKALAIWRILARNYSSGHWKDPKGEMDSQHSSTNVISGKEIAAIEASKILE
KSSDQDLVLQHLGWIADIDQALAVRVLTTERTDQLSPDEVIAAIDPKKVEILQRYLQWLI
ENQDSEDTQFHTAYALLLARSAIQTFDTENSSQNFEAETFGGTDMSAVSKTSLFQSLIRE
RLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYKKLGQETLVLQIFALKLEDSEAAEQY
CAEIGRPDAYMQLLEMYLDPNNGKEPMFRAAVRLLHNHGESLDPLQVLERLSPDMPLELA
SDTILRMLRARLHHHRQGQIVHNLSRAMEIDASLGRLEERSRHVQINEESLCDSCHARLG
TKLFAMYPDDTIVCYKCFRRLGESKSITGRDFKQDPMFKAGWMVTR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactcgagcattccactcgaaccgtactggaacttctatcagatttcagtccc
tccacttcttcgttttttcctctctcttcctccatccgatctctcgcaatctccacttcc
tccgattcccaaaccctaatctacgcgggcacaacctctggcggcgtcctcttgctctcc
gtaaatttcgacacaagaactgtttcgtttctgcgacacgcttcggtgagcgaatctgca
gtggattatttgctcgtaattgaccatgctggccatgttgtggtgttttctggtgggttt
ttgtttctggtggactcgctttttctcggaccggtgaggaagattgggggtctcaagggg
attagtgtgatcgcgaggagggtgcgtagtggtgcttcggagtgttctgatttggtggtg
cgggatgatggtggtggttctagttcgtctgagtttttgagtgcccgccggatgttgctg
aagcttggaggtggtggtggtggtggtgggattcgatcaaatggctggaaagcaaaagag
tccgagcttcgcagcaacgatggtaattccgttttctcaattgtgataggtaggagattg
atcttggtagagcttgttttcggtagtagaagtgggaggaatgatgggcatggggatgga
aatggtgggtcttttgtaattctgaaagaaattcaatgtgttgatggggttaagaccatg
gtgtggcttgatgattctatagtcgttggcagtttaagtgggtacattttgtattcttgt
gttactgggcaaggcagcttgatattttcacttcccgatccatccagtcctccgcgtctc
aaattgttgatggaggaatacaagatgctgttgttggtggacaatgtggggattagtgtt
aatgctcgggggcaaccagttggtggaagcttggtatttcatcgggctcctgattctgtg
ggggagatagcctcgtgtatagctgttgtaaagaatgggaagatggaattgtatcacaaa
agatcaggcaaccgcattcaattggtttcttttgctgaggaaggagttggtccatgtgtt
gtaactgaccaagatgggcgtggtcaacttattgttgttgcaacaccatccaaggttatt
tgctataggaaagtatcttctgaagaacaaattaaataccttttgcgcaagaagaacttt
aaggaagctatcaccttggtggaggagcttcaaagtgaaggtgaaatgacaaaggaaatg
ctctcctttgtccatgctcaggtggggttccttttgctctttgacttgcgttttgaggaa
gctgtaaatcacttcttgctgtcagaaaccatgcagccttctgaaatattcccatttatc
atgagagacccaaaccgctggacattactggtgccaagaaacaggtactggggtttgcat
cctcctcctgtaccccttgaaactgttgtagatgatggattgatggctatccaaagagat
atttttcttaaaaaagcaggggtggagactgcagtagatgatgattttctacttaatcca
cccaatagagctgatttactagaatcaggaataaagaacatcatcaggtacttgcatatt
tctcgtgagaaacatctggatccttctgtgaaggaaggagttgacactcttctgatgtac
ctttatagagccctaaattgtgtagaagatatggagaagcttgcatcttctgaaaacagc
tgtgtagtggaggagttagaaactttgttgaatgactctggccatttacggacgcttgcc
ttcctgtatgcaagtaaaggaatgagctctaaggctcttgctatatggcgtatcttggca
agaaattactcatctggccactggaaggatcctaaaggggaaatggactcacagcattct
tccactaatgtcatctctggtaaggagattgctgcaattgaggcatcaaaaatacttgag
aagtcatctgatcaagatttagtcctgcaacatctgggatggattgcagatattgaccag
gcacttgctgttcgagtattaacaacagagagaactgatcagctttcaccagatgaagta
atagctgcaattgatccaaaaaaggtggaaattcttcaaagatatctccagtggttgatt
gaaaatcaagattctgaagatacacagttccatacagcatatgcactcttgctagcaaga
tcagcaattcaaacttttgatacagaaaattcctctcaaaattttgaagctgaaactttt
ggggggacagatatgtctgcagttagcaagacttcgctctttcaaagtctcatcagggag
agattgcagatctttttgcagtcctcagacctatatgatccagaagacgtccttgacttg
attgaaggatcagaattatggttggaaaaggctattctttacaagaaacttggccaagaa
actttggtgctccaaatctttgcattgaagctggaggacagtgaagctgctgaacaatat
tgtgcagagattggtcggcccgatgcatatatgcagttgcttgaaatgtatttggatcca
aacaatggcaaggagcccatgtttagagctgcagttcgtcttctccacaatcatggagaa
tctttggatcctttgcaagttctggagaggttatcgccagatatgcccctcgaacttgca
tctgatactattttgagaatgttgagagctcgactgcatcatcatcgtcaagggcaaatt
gtacataacctatctcgtgctatggagattgacgcgagtttgggaagattggaggaaaga
tcaaggcatgtgcagataaatgaggagagcctctgtgattcttgtcatgcccgccttggg
acaaagctatttgcaatgtacccagatgataccattgtttgttacaagtgttttcgtcgc
ttgggtgagtccaaatccatcacaggtcgggacttcaagcaagaccccatgtttaaagcg
ggatggatggtgactcgatga
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