Diospyros lotus (date-plum): 127798672
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Entry
127798672 CDS
T10632
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
127798672
Enzymes [BR:
dlt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
127798672
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
127798672
NCBI-ProteinID:
XP_052188166
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All DBs
Position
4:13353356..13358233
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AA seq
729 aa
AA seq
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MGTDVGVKRRNLEGWFLCALQAKPPLTMVTSTAAALLVVLTSLQAAAAFTLPLHIQKECK
YWEEELSAGSGSGSGSGTGCIGEEAAGNQHRKGIASMSAGVQLQIQDDQVVMDNGILQLT
LTNPGGAIIGIRFNGIDNLLELHNPELNGGFWDLNWAQPGNLGTRGKFDRLNGTSFNVIV
ENEDQVELSFTRTWNTSLEADYVPLNIDKRFVLLSGSSGFYSYAIFEHLEDMPALILYET
RIAFMLKIDKFHYMAMADDRQRYMPLPDDRLPGRGQQLAYPEAVLLVNPIEPEFKGEVDD
KYQYSCENKDNKVHGWICFDPPVGFWQISPSNEFRTGGPLKQDLTSHVNPTTLAMFVSAH
YGGEDLALRFEAGEPWKKVFGPVFIYLNTLQEETNPFWLWQDAKEQMKIEVQSWPYSFPN
SDDFPKFHQRGTLTGRFLVQDWYVSDQPQLANGAYIGLATLGESGSWQKESKGYQFWTTA
DEEGHFCIKNIRPGDYNLYAWAPGFIGDYISDFSITITSGCEIDVGDLVFKPPRDGLTLW
EIGFPDRSAAEFYVPDPDPKYINKLYINHPDRFRQYGLWERYADLYPEQDLVYTVGVSDY
RQDWFYAQVNRRSGDKTYEATTWQIMFELENVDEEGSYKLRLALASATHSILEVRINNGE
AEPPHFSREIKGNDNAIARHGIHGLYYLFTVDIPCDQLIQGNNTIFLTQANNSNTFYGIM
YDYIRLEAP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgacgtaggagtaaagagaagaaacttggaaggatggtttttgtgtgcattg
caagccaagcctccattaacaatggtaacttcaacagcagctgctttactagtcgtttta
acaagccttcaagctgccgctgcttttactttgcctctccacattcaaaaggaatgtaaa
tattgggaagaagagttatctgctggttctggttctggttctggttctggtactggttgt
atcggtgaagaagctgcaggaaatcaacacagaaaaggaattgcatcaatgtctgcaggt
gtgcagttgcagattcaggacgaccaagtggtgatggacaatggcatcctccagcttaca
ttaacaaatccaggaggggccatcattggaattcgattcaatggaatcgacaatttactt
gagcttcacaaccctgaactgaatggagggttttgggacctcaattgggcccagccggga
aatttaggcacaagaggcaaatttgataggcttaatggaacaagcttcaatgtcatagtg
gaaaatgaagatcaagtggagctctcattcacaaggacatggaacacctcacttgaagcc
gactatgtccctttaaacatagataaaagatttgtactgcttagtggttcatcaggcttc
tattcctacgcaattttcgagcatttggaggacatgcctgctcttatcctctacgaaact
aggattgcttttatgctcaaaatagacaagtttcactacatggctatggcagatgaccgg
caaagatacatgcctttaccggatgaccggctaccgggaagaggccaacagctagcctac
ccagaagcagtcctccttgtcaatcccatcgagccagaatttaaaggagaggtggacgac
aagtaccaatattcttgtgaaaataaggataacaaggttcatggatggatttgctttgat
ccaccagttgggttctggcaaatcagccccagcaatgagttcagaactgggggacctctc
aagcaggatctgacctcccatgtcaatcctaccactcttgcaatgtttgtaagtgcccat
tatggaggagaagatttggcgctccggttcgaagccggggagccatggaagaaggtcttt
ggacctgttttcatctatctcaacactctgcaagaagaaactaacccattttggctctgg
caagatgccaaagaacagatgaagattgaagtccaaagctggccatacagcttccctaac
tcagatgactttcccaagtttcatcaaaggggtactctgaccggcagattcctagtccaa
gactggtacgtcagcgaccaacctcaactcgcaaatggagcttatatcggcttagccacg
ctgggagaatccgggtcatggcaaaaagaaagcaagggctaccaattctggaccactgca
gatgaagaaggccatttctgcatcaagaacatccgtcccggcgactataatctctatgct
tgggcacctggtttcattggagattatattagcgatttttcgatcaccataacctcaggc
tgtgaaattgacgtgggtgatcttgtgtttaaacctccaagagatggattaactctctgg
gaaataggtttcccggatcgatctgccgcagagttttatgttcctgatcctgatccgaaa
tacataaacaagctctatatcaatcatccagataggtttagacagtatggattgtgggaa
agatacgcagatttgtacccagaacaagatttagtttacacagttggcgtcagtgactat
cgacaggattggttctatgctcaggtgaacaggagaagtggcgacaagacatatgaagca
acaacatggcagattatgtttgagcttgaaaatgtggacgaggagggaagctacaagctg
cgtttggcactcgcctctgccacacattccattctagaggtccgaatcaacaatggagaa
gcagagccacctcatttttcaagggaaattaaagggaacgacaatgcaattgcaaggcat
ggaattcacggactctattatctgttcacagtggacatcccttgtgatcaactcatccaa
ggcaacaacaccatcttcctaactcaagcgaacaactccaacactttctatggcatcatg
tacgactacattcgcttggaagctccctaa
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