Diospyros lotus (date-plum): 127799375
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Entry
127799375 CDS
T10632
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dlt01002
]
127799375
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127799375
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127799375
Peptidases and inhibitors [BR:
dlt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127799375
Ubiquitin system [BR:
dlt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127799375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
127799375
NCBI-ProteinID:
XP_052189322
LinkDB
All DBs
Position
4:complement(14273485..14293048)
Genome browser
AA seq
1138 aa
AA seq
DB search
MPVGGDLGFPYLVLVVSIVGPVVGFVLLRKWQLSVARSEEIKRLLVLASEEAARAELEAS
VNYVASVETIPRPLLYQCAVCYSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKEECHPFTA
THFSNDEGDDSIKVFKQKDSFEIEGRHCAEPIQNFSKDSAGVESDCSSEVLHGNHNIELK
RVADEKGMPSSSCEIKRSDGHQSTNILPDKHENIVAPNVTSSNCTILVNSVDDLSSSGKL
NQIKPNGANCDTHCGSTSSSGWSADGSNGSSFSEPSTPSSGFWEGTINSTRPKLDAVDNS
DQYGSNVTGETGMNNSQSSQNSPFNSDSNTTKRVISDDAHATTLGMKKPIDRAFLSEGLS
ESSLKGRSLLSLGTEKSDNLDACASSDSTLPNFSELRHSTSRSSSSAGRPSTSTSTSKIS
SKQSLSPGRSNSVINDTSNTSLQGAKLDGPLISTHASKISTSRSEWPNGVNSTSTTLHSF
GTKEGGSSSSNASVAHLPSSTRRHSLQGFDSDHAVAGASQHTSYLQNGRNGLKTSMQKVV
DQHKASKSPRNCQPGVGSEIAGKYSNKGLFSYDLFVKLYNWNKIELRPFGLANCGNSCYA
NAALQCLARTPPLTAYLLEGLHSKACARKEWCFTCEFESLMLKAKGGTLSLSPVAMLSQI
RNIGSQLGNWREEDAHEFLRYAIDAMQSVCLKESGVNASSSREETTLVGLTFGGYLRSKI
KCMKCGGKSEQHERMMDLTVEIEGDIGTLEEALRRFTGTEILDGENKYKCSRCRSYERAK
KKLKVLEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYMSGTSDKSPIYKLYGVVV
HLDVMNATFSGHYVCYAKNIQNKWFKFDDSTVKPVDLETVLTKRAYILLYARCSPRAPRL
IRNSLVPRDSRKPKNLPSKSRSHSTDPWDASAADSLNGHAEIECLYPNHRSFQPIQKSLD
EDCSSDNSSSIFSEGCSCSTESSNRDSTSTDDYFDHIFGDSERNWNSSWKMSSDSDFSSS
SSSSSSSPLYSRHSPLADSDRYSSGYAETSGFQAAPKAELDRDDGNGFWTGAGRSSSGDP
ISTRSKQCRNVGKSSGSSSSGSCRETDSNRLGWSNLLGSKKSVVSLRRSTRERTEAAD
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgggaggggatttagggtttccgtacctggtcctggtggtttcgatcgttggt
cccgttgtaggcttcgtcctccttcggaaatggcagctctcggtggccaggagcgaggag
attaagcggcttttggttcttgcctcggaggaggccgctagggctgagctcgaggctagc
gtcaactacgttgcatcggtggagacgattccccgtccgttgctgtaccagtgcgccgtg
tgttattctcccactactacgcgctgttctcggtgcaaggctgtaagatactgctccggt
aagtgtcaaattatacactggagacaaggccacaaggaagaatgccatccttttactgct
actcactttagcaatgatgagggagatgattccataaaggtgttcaaacaaaaagacagc
tttgagattgaggggaggcattgtgctgaaccaattcaaaatttctccaaggactctgca
ggtgtagagtcagattgctcttctgaggttcttcatgggaatcacaacattgaactcaag
cgtgttgctgatgagaaagggatgccttcaagttcatgtgaaattaaaaggtcagatgga
catcaatccactaatatcttacccgataaacatgaaaacattgtggcaccaaatgttaca
tcttcaaattgcactattttggtcaattctgtagatgacctttctagttcaggaaagtta
aatcagatcaaacccaatggtgccaattgcgatactcattgtggctcaacaagttcttcg
ggttggagcgctgatggctccaatgggtcttcattttctgaaccttctaccccctcctct
ggtttttgggaaggaaccatcaactccactaggcccaaacttgatgctgttgataattct
gatcagtacggttccaatgtcacgggagaaactggcatgaacaattctcaatcttctcaa
aattctcccttcaattctgatagcaatactaccaaaagagtcatatcagatgatgctcat
gcaactactttggggatgaagaagcctattgatagggcatttttatccgaaggattaagt
gaaagttctttgaagggcaggagtttactatcattgggcactgaaaagtctgataatttg
gatgcttgtgctagcagtgattcaactctacctaatttcagtgaacttagacattccaca
tctaggtctagttcaagtgctggaaggccttcaactagtacctctacttcaaaaatcagt
agcaagcagtccttgagccctggaagatcaaatagtgtcattaatgacacaagcaatact
tcattgcaaggtgcaaaacttgatgggcctttaattagtacacacgcttcaaaaatcagt
acttcgcggtctgaatggccaaatggggttaacagcacaagcactaccttgcattcattt
ggaactaaagagggtggatcttcatcttctaatgcttctgttgctcatcttccatctagc
accaggagacattcacttcaggggtttgatagtgatcatgcagttgctggtgcatctcag
catacaagttatctacaaaatggtagaaatggcttgaagacatcaatgcagaaagttgtt
gaccagcacaaagcatctaaatcacctaggaactgccaacctggggttggaagtgaaatt
gctggaaaatacagtaataagggtctgttttcgtatgatctatttgtcaagctttacaat
tggaacaagattgaactccgaccatttggcttggcaaattgtggaaacagctgttatgca
aatgctgcgctccagtgcttggctaggacaccgcctctaactgcttatcttcttgaaggg
cttcattctaaagcttgtgcacggaaagaatggtgcttcacctgtgaatttgaaagttta
atgctgaaggcaaagggtgggactttatcactctctccagttgcgatgttatcccagatt
cgaaacattggcagtcaacttggtaattggagagaagaagatgctcatgaatttctaagg
tatgctattgacgcaatgcaatctgtttgtctcaaggaatctggagtaaatgcaagctct
tcgagagaagaaacaactcttgtgggccttacatttggtggctatcttcgatcaaagata
aagtgcatgaagtgtggaggcaaatctgagcagcatgaaaggatgatggatctcactgtt
gaaatagaaggagatattggaactctagaagaggctcttcgacggtttactggcactgag
attctggatggtgaaaacaagtacaaatgcagcagatgcagatcctacgagagagccaaa
aagaagttgaaggtattggaggctcctaatgttcttactattgcattaaagcggtttcag
tctggtaaatttggaaagctcaataagtctattcggttcccggagattctggatttggcc
ccatatatgagtgggactagtgacaaatcacctatatacaagctttatggggttgtagtt
cacttggatgtcatgaatgctactttttctggtcactatgtatgctatgctaagaacatc
cagaacaaatggttcaagtttgatgacagtacggtcaagccggtggatcttgaaaccgtc
ttaacaaaaagggcgtacatacttctgtatgccagatgctctcctcgtgctccaagattg
ataaggaattcattggtaccccgggactcgagaaaacccaaaaatcttccctctaaatca
agatctcactcaacagatccttgggatgcttctgcggctgattctttaaatggtcatgcg
gagattgaatgcttgtatccaaatcacaggagtttccagcctatccagaaaagtttagac
gaggactgctcgagtgacaattcttcgtccatcttctctgagggatgttcctgcagtacc
gagagcagcaacagggattctaccagtacagatgactactttgaccacatttttggagat
tcagaaaggaattggaacagctcatggaagatgtcatcagactccgacttctcttcctca
tcttcctcttcctcgtcctctcccttgtactcaaggcattcaccccttgctgactcagac
aggtactcctcaggatacgcggagaccagtggcttccaagctgctccaaaagcggaatta
gacagagatgatgggaatggtttctggacgggagcaggcagaagcagcagtggggatccc
atctcgacaagaagtaaacagtgtagaaatgtaggaaaaagtagcggtagtagcagtagt
ggtagctgtagggagactgactcaaacagattaggatggtctaaccttctcgggagcaag
aaatctgttgtatctctcagaagatcaacgagggaaagaacagaagcagcagattaa
DBGET
integrated database retrieval system
