KEGG   Diospyros lotus (date-plum): 127799500
Entry
127799500         CDS       T10632                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127799500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dlt03021]
    127799500
Enzymes [BR:dlt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127799500
Transcription machinery [BR:dlt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127799500
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 Clink
Other DBs
NCBI-GeneID: 127799500
NCBI-ProteinID: XP_052189545
LinkDB
Position
1:38736723..38781830
AA seq 1910 aa
MEESPSTTVWDGRITGIKFGLASSEEICISSNSDFPITHASQLANPFLGLPLDSGKCESC
GAVEPGNCEGHFGYIELPIPIYHPSHLSELKRLLSLLCLKCLKLKSGKFQVKDIGFLERA
LSSCCEEASQISVDEVTTTDGAGYIELKLPSKSNIREGYWNFLDRYGYRYGEGKRRPLLP
SEVNAILKKIPAETKKKLAVKGYFPQDGYIIQYLPVPPNCLSVPDISDGITVMSSDLSIT
MLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQATVAQYLRVRGAAKASRDVETRFGIRK
ELNDSSTKAWLEKMKTLFIRKGSGFSSRSVITGDAYKGVQEIGLPFEIAQRITFEERVTQ
YNMQYLQKLVDEKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRVMDGDIVFINRPPT
THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVDK
QLQSSHSGNLNLQLTTDSLLSLKIMFKNYFFSRAVAQQLVMFVSNSLPLPAVVKAQRSGP
QWTALQVLQTALPRCFDFWKETSLIRQSEILSIDFSRDLLQGMTNDIITSIFCDKDPGEV
LKFFNFLQPLLMEHLFSNGYSVSLEDFSIPTEVVKDIKKCIQDVSPLLRHLRSAYNELVE
LQLENQLRLLRVPVANFVLKSSAIGNVIDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKS
LVGDMAYLFEKKYPLCGTHPSEEFGLVTSCLFHGLDPYQEMVHSISAREVIVRSSRGLTE
PGTLFKNLMAILRDVVICYDGTVRNLCSNSIIQFEYGYKPGTKRLFVAGEPVGVLAATAM
SNPAYKAVLDSSPSSNSSWEMMKEILLCSVNFKNDLSDRRVIIYLNDCDCGRKYCRENAA
YLVKNQLKKVRLKDIAAEFLIEYNGLQRMHGSSEFDANLLGHVHLNKAQFEGLHMDLQEA
CEKCQETMNSFRKKKKVGHLFKRLKISACEDCSFGQSSDIGVPCLKFWQDIGGDHLERNS
HILADTVCPVLLETVIKGDRRVCWANVIWISPDTTTWIRNPCKSKEGELALDVVLEKEAI
KRSGDAWRILMDCCLPVIHLIDTSRSIPNAIKQVQELLGISCAFEQAVQRLSTSVSMVAK
GVLKDHLILLANSMTCPGNMIGFNSGGIKALSRSLNVQVPFAEATLFTPKKCFERAAEKC
HADSLSSIVASCSWGKHVTVGTGSQFDVLWGTREVGLNNQEGIDVYNFLHLVRSSREEET
GTDCLGTEIDNIELENDDMEWAPSPDRSSDKPIFEDSSEVQNDLEDLTVDWSRPSGSNWE
KVSCLNTESSGRNDDHGDGKDWMVDKKQNLGGKKSLSESSGWSSWGLGTVRTDDVLCTTT
EKTKQGDTSKTVVGWGHSNSDRSDELESQSGKRKESPSYFWNSSGNDESNDGIDWMAGKK
PHPGAGVTPTNPSGSSSWGADSVKTQDNLWNSSQNDKSNDGNDWLDGKKKILGSSTMSVN
PSGWSSWGADTGKTHDNLWNSSQNDESNDEWLAGKKKNLGAGTAPANPSGWSSWGADAGK
TQDNLSRRPPELQQDILVDESQCTVDEKSQAGQKKESPASLWNRSQNVMNEQTNQSASES
GWDPANTVSQNESVQPQWGKPRRFSSKKEQTDSPRGWGSSNTGDWKNKAVGNLTATRQRL
DMFTSEEQDILSDVELIMQSIRRILHQTGYNDGDPLSAEDQSFVLDNVFTHHPDKSTKMG
AGIDYVMVTKHSSFQDSRCFYIVKTDGHKEDFSYRKCLENFIRGKYPDRAEAFIPKYFKK
PRSGWNRERSVAPDEAGPDNRPARSGWNRESSIAPDEAVSENRRARSGWNRESSVAPDEA
GPENRPARSGWNRESSVAPDDARPGNKPARSGWNREGSVTPDEAEPKNRW
NT seq 5733 nt   +upstreamnt  +downstreamnt
atggaagagagcccctcaacaacagtttgggatgggagaataacagggattaaatttggt
ttggcatcctctgaggagatttgcatatcttccaatagcgactttcctataactcatgct
agtcagcttgcgaatcctttccttggtttgccacttgactcgggaaaatgtgaatcatgt
ggtgcagtggaacctggaaactgtgaaggtcattttgggtatatagagttaccaattccc
atttatcacccttcacatttgagcgagctgaagaggttactgagtttactgtgcttgaaa
tgtttgaagctaaaaagtggaaagtttcaggtcaaagacattggctttcttgaaagagct
ttgtcctcatgttgcgaggaggcttctcaaatttctgttgacgaggttacaacaacagat
ggcgcaggctacatagagttaaaactgccatctaagtcaaacatccgagaaggatactgg
aattttttagacagatatggttacagatatggtgaaggcaaaaggcgacctttgcttcct
tctgaggtgaatgcaattctaaaaaaaatacctgcggagaccaagaaaaagcttgctgtg
aaaggatacttccctcaagatgggtatatcatccaatatttgccagtcccgccaaactgt
ttgtctgttccagacatatctgatggaattactgtcatgtcctcagatctctctattacg
atgctgaagaaagtactgaagcaagttgagattatcaaaagttcaagatctgggacccca
aattttgaatctcatgaagttgaagcaaatgatttgcaagcaacagttgcacagtatctt
cgagttagaggtgctgccaaggcatctcgtgatgttgaaacaagatttgggattagaaaa
gagctgaatgattcttctactaaagcatggcttgagaagatgaagaccttatttatccga
aagggttcaggattctcttcacggagtgttattactggtgatgcgtataaaggtgtccag
gaaattggactaccttttgaaattgctcaaaggattacattcgaggagagagttactcag
tataatatgcagtatctgcagaagctggtcgatgaaaaactctgtttaacctatagggat
ggttcatcaacttattctctacgggaaggttcaaagggacatacctttttaagacctggt
caagtggtacatcgacgggtaatggatggggatatagttttcataaatagaccaccaacc
actcacaaacattccctccaagctttgtcagtatatgttcacgatgatcatacggtcaag
atcaacccgcttatttgcgggccacttagtgctgattttgatggggactgtgttcattta
ttttatccccaatctcttgctgctaaagcagaggttttggaactcttctctgttgacaaa
cagttgcagagttctcatagtgggaaccttaacttgcaattgaccactgattcgttatta
tctctaaaaattatgtttaagaattacttcttctctagagcagtggcccaacagttagtg
atgttcgtttcaaattctttgccattgccggcagtggtgaaggctcaaagatcaggccct
cagtggactgctttacaagtattacagactgctcttccgcggtgctttgacttttggaag
gagacaagtctcattcgacaaagtgaaatactgagtatagattttagcagagacctttta
caaggaatgactaatgatattattacctctattttctgtgacaaggacccaggggaagtt
ttaaagttctttaactttttacagcccttgctcatggaacatttgttttcaaatgggtat
agtgtgagcctagaagatttttccatacccacagaggtagtgaaagatattaaaaaatgc
attcaggatgtttcaccattgttgcgtcatttgcggtcagcttataacgagttggtagag
ttgcaattggagaatcagttgcgacttttgagagttcctgttgcaaattttgttctgaag
tcctcagcaataggtaatgtaatagattctaaaagtgattcagccattaataaagttgtc
caacaaattgggttcttggggttgcaactttcagacaaggggaaattttactccaagagt
ttggtaggtgacatggcttatctttttgagaagaagtatcctctgtgtggtacccatcca
tctgaggagtttggcctggtgacgagttgcctttttcatggcttggatccatatcaggag
atggttcattctatttctgccagggaagtgattgtccgttcgtctagaggattgacagaa
ccggggactctattcaagaatttaatggccatacttcgggatgttgtcatctgttatgat
gggacagtgaggaatctctgtagcaattcaataattcaatttgagtatggttataagcct
gggacaaagagattatttgttgctggtgaacctgttggtgtgttggctgcaactgccatg
tcaaatccagcatataaagcagtccttgactcttccccgagcagtaattcctcatgggag
atgatgaaggagatacttctttgctcagtaaatttcaagaatgatctctcagaccgacgg
gtaataatatatttgaatgattgtgattgtgggagaaagtattgccgagaaaatgctgcg
tatctggttaagaatcagttgaaaaaagtcagactaaaggatattgctgctgaattcttg
attgagtataacgggctacaaagaatgcatggaagttctgaatttgatgctaatcttctt
ggccatgttcatcttaataaggcacagtttgaaggcttgcatatggacttgcaagaggct
tgtgagaaatgccaagaaactatgaattcatttcggaagaagaagaaagttggtcatctc
ttcaagagattaaaaatatctgcatgcgaagattgttcttttgggcaatcatcagatatt
ggtgtgccgtgcttgaagttctggcaagacattggtggtgatcatctagagaggaactca
catattcttgctgacacagtttgtcctgtcttgctagaaactgttattaaaggtgaccga
agagtttgctgggcaaatgtgatttggattagtccagatacaacaacttggatcagaaat
ccttgcaagagtaaagaaggcgaactggctttggatgttgtcctggagaaagaagctatt
aagcggtctggagatgcatggaggattctcatggactgttgccttccagtcattcatcta
attgacacaagtcgttcaatccccaatgcaataaagcaagtacaggaactgcttggaatt
tcttgtgcttttgagcaagctgttcagcgcctctcgacatcagtgtcaatggttgcaaaa
ggtgtgcttaaggatcatcttattctcttggctaatagtatgacatgccctgggaatatg
attggtttcaatagtggtggtataaaagcactgtctcgatcactgaatgtccaagtacca
tttgcagaggcaacattgtttacaccaaaaaaatgctttgagagagctgccgaaaagtgt
catgctgattccttatcaagcatagttgcttcatgttcatggggaaaacatgtgactgtt
ggcacaggctctcaatttgacgttctttggggcacaagagaggttggactgaataatcaa
gagggaattgatgtctataactttcttcatttggtaaggagttcgagagaagaggaaaca
ggaactgattgtcttggcacagaaattgataacattgaactggagaatgatgatatggaa
tgggccccatctccagaccgtagctctgataagccaatctttgaagatagttctgaagtt
cagaatgacttggaggatctgacagtggactggagtaggcccagtggatctaattgggag
aaggtttcatgtctaaatacagagtccagtggcaggaatgatgaccatggtgatggaaaa
gattggatggtagacaaaaaacaaaacttggggggtaaaaaatcattgtcagaatcaagt
ggttggtccagttggggtcttggtacagttcgaacagatgatgtactttgtacaaccact
gagaaaacaaaacagggggatacttctaaaactgttgttggttggggccattccaatagt
gatcgatcagatgaattggaatctcagtcaggaaagcgaaaagagtctccttcctatttc
tggaattccagtggaaatgatgagtccaatgatggaattgattggatggctggaaaaaag
ccacatcccggtgctggcgtaacaccaacaaatccaagtgggtcttccagctggggagct
gattctgtgaagacacaggataacctctggaattccagtcagaatgacaagtccaatgat
gggaatgattggctggatggaaaaaagaaaattctaggttccagtacaatgtcagtaaat
ccaagtgggtggtccagttggggagctgacactgggaagacacatgataacctctggaac
tccagtcaaaatgatgagtccaatgatgaatggctggctggaaaaaagaaaaatctaggt
gctggcacagcaccagcaaatccgagtggttggtccagttggggagctgatgctgggaag
acacaggataacctctctagaagaccaccagagctacaacaggatattctggttgatgag
agccaatgtacagttgatgaaaaatctcaggctggacagaagaaagaatcacctgccagt
ttatggaatcgcagtcaaaatgtaatgaatgaacagacaaatcaatcagcaagtgaaagt
ggctgggatcctgcaaacacagtcagtcagaatgaaagtgtacaaccacagtggggtaag
ccaagaaggttctcttctaagaaagaacaaactgatagcccacgtggttggggttcctct
aatactggagattggaaaaacaaagcagttggaaatttaactgcaacaagacagcgattg
gatatgttcacctctgaggaacaagatattttgtcagatgttgagttgataatgcaatct
attagaagaattctgcatcagactgggtacaatgacggggatccattgtctgccgaggat
cagtcattcgtgcttgacaatgtgttcactcatcatcctgataaaagtacaaagatggga
gcagggatagattatgtaatggttacgaagcacagcagttttcaggacagcaggtgcttc
tatatcgtcaagacggatggtcacaaagaggatttttcttaccgcaaatgtttagagaac
ttcatcagggggaagtaccctgacagggctgaagctttcattccaaagtacttcaagaag
cctcgttctggatggaaccgagaacgcagtgttgctccggatgaagctgggcctgataac
aggcctgctcgttctggttggaacagggaaagcagtattgctcctgatgaagccgtgtct
gaaaacaggcgtgctcgttctggttggaacagggaaagcagtgttgctcctgatgaagcc
gggcctgaaaacaggcctgctcgttctggttggaacagggaaagtagtgttgctcccgat
gacgccaggccaggaaacaagcctgctcgttctggttggaacagggaaggcagtgttact
ccagatgaagccgagccgaaaaacaggtggtag

DBGET integrated database retrieval system