Diospyros lotus (date-plum): 127799638
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Entry
127799638 CDS
T10632
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127799638
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dlt01002
]
127799638
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127799638
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127799638
Peptidases and inhibitors [BR:
dlt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127799638
Ubiquitin system [BR:
dlt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127799638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
127799638
NCBI-ProteinID:
XP_052189806
LinkDB
All DBs
Position
4:complement(443649..452025)
Genome browser
AA seq
1089 aa
AA seq
DB search
MGKRVKKARSGHKEKRVSTPSHKTTAQHSISTMETVDDGLSVTKERKVCPHIDRGIDLEK
FSSKIGSTEQIRCEDCREGVIDRRASKGRGKQGKKKGGGSVDAKPACNAIWVCLDCAHFS
CGGIGFPTTPQSHAVRHARLTHHPMAIQFENLQLRWCFRCNMLIPAEKLEETGEQKDPLA
DILKLIKGRSSQVAPVDVEDVWLGSGSISSKVKSESTVLRSLDGRSGYLVRGLVNLGNTC
FFNSVMQNLLAMNRLRDHFLEMDESIGPLTVSLKKLFVETNPEAGLRSVINPRSFFGCLC
TKAPQFRGYQQHDSHELLRCLLDCLCTEELSARKRSTFRENGFSTNLGPTFIDAIFGGQL
SSTVSCLECGHSSTVFEPFMDLSLPVPTKKPQSKRAQSISKAKKQKLPPKRSGRGRPKVN
KDASSEASVNVSNPSAGGTSSHHAESVVPVDEKMGDALSDSAHSKSVGQDTDADKKSSDS
SDLLTAAEFEKKPFLNNICDKTEASLDESTWLDYLEQDPITNNPDTASRAIFTAVTNDSG
KSDAVQNGASLQDVIEYRRQIHSNCKVEVATSLENLTWLDYLDEITVSDDYDLASKVNDS
SVSQDLGGKDADQNDISLLDRSGANSQASSSYWESNLEVSYPGNSFESEHPLQLQGSEVL
LLPYKEESSTSGEVFRGEGDTYSSAVGCEPDSLDFDGFGDLFDEPEIAAGPTSDNSFQVN
EVAETGLLVGNSSDSDPDEVDNSDSPVSIESCLAYFTKPDLLSKEDAWHCENCSKALQEQ
MIQSRKMQKKVTSKIWTSGVEDKLLSSSTSSAKRVHFPSEVRNLSGERRKGGVTATNESL
VSDNGNGDNQNYKDEARQKIEPILAVSQSGEGIDEMSDLLAELTQSSSYRTCSQSSVSGE
ASDSCSVAEPSKAGCNSDVVQERKEHLLSGGSQSEGSGNEEIILESVKVKRDATKRTLIN
RTPPILTILLKRFSHDARGRLSKLNGHVEFREMIDLRPYIDPRIGHRCRETGEYKFRLLG
VVEHQGSMRGGHYVAYVRGGKGNSSNSEKEENENGGFVWYHASDTHVRQASLEEVLRSEA
YILFYENLL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggttaagaaggctcgcagtggtcataaggagaagcgggtgtctacccct
tctcataaaactactgctcagcatagtatttcgaccatggagactgtggatgatggactt
tcagtcacaaaagagaggaaagtatgcccccatattgacaggggtattgatttggaaaaa
ttttcttcaaagatagggtctacagaacaaattaggtgtgaagattgtcgggagggtgtt
attgataggcgggcaagcaagggaagaggcaagcaggggaagaagaaagggggaggttct
gtggatgcaaaaccagcgtgcaatgcaatttgggtttgtttggattgcgcgcatttttct
tgtggagggattggatttccaacaacacctcaaagtcatgcagttcggcatgccaggcta
acccatcaccctatggctatccaatttgaaaaccttcagctgcgttggtgcttccgttgc
aatatgcttattccagctgaaaaattggaggaaactggtgaacaaaaagatccactagca
gatatcttgaaactgataaagggcaggtcatcacaagttgcccctgtggatgttgaggat
gtttggcttgggagtggcagtatttcaagcaaggtaaaatcagaaagcactgttctgaga
agtttggatgggagaagtggttacttagtcagaggtttggttaatcttggtaatacttgc
ttctttaactcagtcatgcagaatctcttggcgatgaatagattgcgggatcacttctta
gaaatggatgaatcgattgggcctcttaccgtttctttgaagaagctctttgttgaaact
aatccggaggctggcttgagaagtgtgataaacccaagatccttttttgggtgtctttgt
accaaggctccccaattcaggggatatcaacagcatgacagtcatgaattgcttcgttgt
ttacttgattgtttgtgtactgaagaactcagtgcacgaaaacggagtaccttccgggaa
aatgggttttctacaaatctgggtcctacttttatagatgccatctttggcggtcaacta
tctagtactgtttcttgtttggaatgtggtcactcttcaacagtgtttgagccatttatg
gatctctcactcccagttccaaccaagaaaccccagtcaaaaagagctcaatcaatttct
aaagccaagaaacaaaaactgcccccaaaaagaagtggacggggtcgtcctaaagttaac
aaggatgcaagttctgaggcatctgtaaatgtttcaaatccatcagctggtggtacatcc
tcccaccatgcagaatctgtggtgcctgttgatgaaaaaatgggagatgcattatctgat
tctgcacattctaaatcagttggccaagatacagatgcagataagaaaagttcagattca
tcagatctcttgactgctgcggagttcgaaaagaagccattcctcaataatatttgtgat
aaaacagaggcctcattagatgagtcaacatggttagattacctggaacaagatcctata
acaaacaaccctgatacagcatcacgggctatctttactgcagtaactaatgattcagga
aaaagtgatgctgttcaaaacggtgcctcattacaggatgtcatagaatatagaaggcag
atccactcaaattgtaaggtagaagtagcaacctctttggaaaatttgacatggttggat
taccttgacgaaatcaccgtatcagatgattatgatttggcttcaaaagtaaatgattcg
tcagtaagtcaagatttgggaggcaaggatgctgatcagaatgatatttctttactagat
agatcaggagctaattctcaggcttcctctagttattgggagtcaaatcttgaagttagt
tatccaggcaattcttttgagagtgagcaccctttgcagcttcaaggttctgaagttttg
ttacttccttacaaagaagaaagttcaactagtggggaggtattcagaggagaaggtgat
acctactcatcagctgttggttgtgaaccagattcattggattttgatggctttggagac
ttatttgatgagccagagattgctgctggcccgacaagtgacaatagttttcaggtaaat
gaagttgcagaaactggtctcttagttggaaatagcagtgactctgatccagatgaggtg
gataatagtgattctccagtgtccattgagagttgtttggcatattttacaaagcccgac
cttctttctaaagaggatgcttggcattgtgaaaattgttcaaaagctctgcaagagcaa
atgattcagtcaaggaaaatgcagaagaaagttacatcaaagatttggacaagtggggtt
gaggataaacttctaagttcctcaacaagttctgcaaagcgtgtccatttccctagtgag
gtcagaaacctaagtggagagaggagaaaaggcggtgttactgctacaaatgaaagttta
gtctcagataatggaaatggtgataaccagaattacaaagatgaagccagacaaaaaatt
gagccgatcctggcagtttctcagtcaggagaaggaattgatgagatgagtgatttactg
gcagagctaactcagtcttcaagttatagaacttgtagtcaatcaagtgtcagtggtgaa
gccagtgactcttgcagtgttgctgagcctagtaaagctggatgtaatagtgatgtggtc
caggaaaggaaggagcacttgttatctggaggatctcaatcagaaggaagtggcaatgaa
gagattattcttgagagtgtgaaggtgaagagagatgctactaaaaggaccttaattaac
agaacaccacctatattgactattcttcttaagaggttcagccatgatgctcgtggtcgt
ttgagtaaattgaatggccatgtagaattcagagagatgattgatctcagaccatacata
gatcccaggattggacacagatgcagagagacaggggaatacaagtttcggcttcttggg
gtggtggagcatcaggggagcatgagagggggccactacgtagcatatgtgagaggagga
aagggaaacagcagcaacagtgagaaagaagaaaatgaaaatggaggttttgtgtggtat
catgccagtgatactcacgttcggcaggcgtctttggaagaagttcttcgcagtgaggcc
tatatcctattttatgaaaatcttctttga
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